RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 TTLQ8NG68 377 aa12.55□□□□□ -0.4
PTPRK-207ENST00000368226 C10orf82Q8WW14 230 aa12.55□□□□□ -0.4
PTPRK-207ENST00000368226 PRAP1Q96NZ9 151 aa12.55□□□□□ -0.4
PTPRK-207ENST00000368226 GPR174Q9BXC1 333 aa12.55□□□□□ -0.4
PTPRK-207ENST00000368226 POLR2J3Q9H1A7 115 aaKnown RBP12.55□□□□□ -0.4
PTPRK-207ENST00000368226 LDAHQ9H6V9 325 aa12.55□□□□□ -0.4
PTPRK-207ENST00000368226 ITM2CQ9NQX7 267 aa12.55□□□□□ -0.4
PTPRK-207ENST00000368226 SPHK2Q9NRA0 654 aa12.55□□□□□ -0.4
PTPRK-207ENST00000368226 K7ERQ8 282 aa12.55□□□□□ -0.4
PTPRK-207ENST00000368226 EI24O14681 340 aa12.55□□□□□ -0.4
PTPRK-207ENST00000368226 KMOO15229 486 aa12.55□□□□□ -0.4
PTPRK-207ENST00000368226 C6orf47O95873 294 aa12.55□□□□□ -0.4
PTPRK-207ENST00000368226 PRDX6P30041 224 aa12.55□□□□□ -0.4
PTPRK-207ENST00000368226 SLC5A11Q8WWX8 675 aa12.55□□□□□ -0.4
PTPRK-207ENST00000368226 MUC13Q9H3R2 512 aa12.55□□□□□ -0.4
PTPRK-207ENST00000368226 P2RX2Q9UBL9 471 aa12.55□□□□□ -0.4
PTPRK-207ENST00000368226 RENP00797 406 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 CCNOP22674 350 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 NDUFS1P28331 727 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 VSX2P58304 361 aaPredicted RBP12.54□□□□□ -0.4
PTPRK-207ENST00000368226 RTP2Q5QGT7 225 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 GALNT10Q86SR1 603 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 SLC9B2Q86UD5 537 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 OXR1Q8N573 874 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 HM13Q8TCT9 377 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 LRRC58Q96CX6 371 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 KLHDC7BQ96G42 594 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 GMLQ99445 158 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 USP29Q9HBJ7 922 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 SPATA6Q9NWH7 488 aaPredicted RBP12.54□□□□□ -0.4
PTPRK-207ENST00000368226 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.54□□□□□ -0.4
PTPRK-207ENST00000368226 A0A1B0GVT2 93 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 ZNF726A6NNF4 738 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 AIREO43918 545 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 PRAMEF12O95522 483 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 PRPS1L1P21108 318 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 MAPK14Q16539 360 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 RAB6CQ53S08 254 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 ALG1LQ6GMV1 187 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 CROCCP3Q8IVE0 287 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 PHOSPHO1Q8TCT1 267 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 NODALQ96S42 347 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 EFCAB11Q9BUY7 163 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 RAB6CQ9H0N0 254 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 SNTG1Q9NSN8 517 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 LINGO3P0C6S8 592 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 RAP2AP10114 183 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 SDC2P34741 201 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 HSD17B2P37059 387 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 VEGFBP49765 207 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 XKP51811 444 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 CEBPGP53567 150 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 TCEAL6Q6IPX3 200 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 CEACAM20Q6UY09 585 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 ZZZ3Q8IYH5 903 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 GLB1L3Q8NCI6 653 aaPredicted RBP12.54□□□□□ -0.4
PTPRK-207ENST00000368226 S100ZQ8WXG8 99 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 OVCA2Q8WZ82 227 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 RFKQ969G6 155 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 TMEM203Q969S6 136 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 FLRT1Q9NZU1 646 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 FAM172BPA6NC97 362 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 H7C0S8 307 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 SCDO00767 359 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 ZNF208O43345 1280 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 MLLT10P55197 1068 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 SMCO1Q147U7 214 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 SPIN4Q56A73 249 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 SMPDL3AQ92484 453 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 PHF12Q96QT6 1004 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 TPSD1Q9BZJ3 242 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 ADAM7Q9H2U9 754 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 METTL7AQ9H8H3 244 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 IFT46Q9NQC8 304 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 PDE10AQ9Y233 779 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 WBP11Q9Y2W2 641 aaKnown RBP12.54□□□□□ -0.4
PTPRK-207ENST00000368226 HEPACAM2A8MVW5 462 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 LATO43561 262 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 TLX3O43711 291 aaPredicted RBP12.54□□□□□ -0.4
PTPRK-207ENST00000368226 ZNF30P17039 623 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 NNATQ16517 81 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 LPAL2Q16609 132 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 C5orf22Q49AR2 442 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 DPY19L3Q6ZPD9 716 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 HIST1H2AAQ96QV6 131 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 OR8D2Q9GZM6 311 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 ADAMTS10Q9H324 1103 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 IL1RAPQ9NPH3 570 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 RAB26Q9ULW5 256 aa12.54□□□□□ -0.4
PTPRK-207ENST00000368226 SOX14O95416 240 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 SLC10A3P09131 477 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 CBX5P45973 191 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 ARRB1P49407 418 aaPredicted RBP12.53□□□□□ -0.4
PTPRK-207ENST00000368226 INCA1Q0VD86 236 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 FBXO42Q6P3S6 717 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 LINGO2Q7L985 606 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 TSACCQ96A04 125 aaPredicted RBP12.53□□□□□ -0.4
PTPRK-207ENST00000368226 ZFP3Q96NJ6 502 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 TMEM109Q9BVC6 243 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 B3GNT4Q9C0J1 378 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms