RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 IL36AQ9UHA7 158 aa11.36□□□□□ -0.59
COPA-202ENST00000368069 PPP6CO00743 305 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 INPPL1O15357 1258 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 SOCS5O75159 536 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 GPX3P22352 226 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 KELP23276 732 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 ACRV1P26436 265 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 VBP1P61758 197 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 RPS13P62277 151 aaKnown RBP11.35□□□□□ -0.59
COPA-202ENST00000368069 CYBRD1Q53TN4 286 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 PAGE3Q5JUK9 113 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.35□□□□□ -0.593e-9■■■■■ 37.6
COPA-202ENST00000368069 IZUMO1Q8IYV9 350 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 OLIG1Q8TAK6 271 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 CLIP3Q96DZ5 547 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 COL21A1Q96P44 957 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 POLR2J2Q9GZM3 115 aaKnown RBP11.35□□□□□ -0.59
COPA-202ENST00000368069 ARMC1Q9NVT9 282 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 CDC14AQ9UNH5 594 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 NHSQ6T4R5 1651 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 TRBV23OR9-2A0A075B6M9 112 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 FAM240BA0A1B0GVZ2 78 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 C2orf78A6NCI8 922 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 SCAMP1O15126 338 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 FGF4P08620 206 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 TCF3P15923 654 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 SDC2P34741 201 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 TMBIM6P55061 237 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 SP140Q13342 867 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 LRP8Q14114 963 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 PRAMEF14Q5SWL7 426 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 PRAMEF13Q5VWM6 474 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 KCTD11Q693B1 232 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 ENPP6Q6UWR7 440 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 AMZ2Q86W34 360 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 SRFBP1Q8NEF9 429 aaKnown RBP11.35□□□□□ -0.59
COPA-202ENST00000368069 FAM110BQ8TC76 370 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 PIK3R3Q92569 461 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 ANKRD60Q9BZ19 345 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 OR51B5Q9H339 312 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 RIMS3Q9UJD0 308 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 ANKRD12Q6UB98 2062 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 HMX2A2RU54 273 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 UPK3BL1B0FP48 263 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 UPK3BL2E5RIL1 263 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 K7ERQ8 282 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 LDB2O43679 373 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 HPRP00739 348 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 PENKP01210 267 aaPredicted RBP11.35□□□□□ -0.59
COPA-202ENST00000368069 ZNF30P17039 623 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 STK19P49842 368 aaPredicted RBP11.35□□□□□ -0.59
COPA-202ENST00000368069 SCN1BQ07699 218 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 KIAA0319Q5VV43 1072 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 ZNF783Q6ZMS7 281 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 CENPSQ8N2Z9 138 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 OR13J1Q8NGT2 312 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 ZNF514Q96K75 400 aaPredicted RBP11.35□□□□□ -0.59
COPA-202ENST00000368069 C3orf30Q96M34 536 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 SEZ6LQ9BYH1 1024 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 BRINP2Q9C0B6 783 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 CSNK1G1Q9HCP0 422 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 ZCCHC3Q9NUD5 404 aaKnown RBP11.35□□□□□ -0.59
COPA-202ENST00000368069 SPATA7Q9P0W8 599 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 LAMB2P55268 1798 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 FAM86C2PA6NEL3 165 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 DNTTP04053 509 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 GABRB3P28472 473 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 TLE2Q04725 743 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 CXorf57Q6NSI4 855 aaKnown RBP11.35□□□□□ -0.59
COPA-202ENST00000368069 Q6ZVL8 140 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 LARP4Q71RC2 724 aaKnown RBP eCLIP11.35□□□□□ -0.59
COPA-202ENST00000368069 GET4Q7L5D6 327 aaPredicted RBP11.35□□□□□ -0.59
COPA-202ENST00000368069 GALNT13Q8IUC8 556 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 PIGXQ8TBF5 258 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 USP3Q9Y6I4 520 aa11.35□□□□□ -0.59
COPA-202ENST00000368069 SRPRAP08240 638 aaKnown RBP11.34□□□□□ -0.59
COPA-202ENST00000368069 ACRP10323 421 aa11.34□□□□□ -0.59
COPA-202ENST00000368069 SAGP10523 405 aaPredicted RBP11.34□□□□□ -0.59
COPA-202ENST00000368069 GTF2E2P29084 291 aaKnown RBP11.34□□□□□ -0.59
COPA-202ENST00000368069 TIE1P35590 1138 aa11.34□□□□□ -0.59
COPA-202ENST00000368069 LARS2Q15031 903 aaKnown RBP11.34□□□□□ -0.59
COPA-202ENST00000368069 KRT74Q7RTS7 529 aa11.34□□□□□ -0.59
COPA-202ENST00000368069 SLC30A8Q8IWU4 369 aa11.34□□□□□ -0.59
COPA-202ENST00000368069 C9orf43Q8TAL5 461 aaPredicted RBP11.34□□□□□ -0.59
COPA-202ENST00000368069 SCAMP4Q969E2 229 aa11.34□□□□□ -0.59
COPA-202ENST00000368069 OMA1Q96E52 524 aa11.34□□□□□ -0.59
COPA-202ENST00000368069 LMAN2LQ9H0V9 348 aa11.34□□□□□ -0.59
COPA-202ENST00000368069 MAP10Q9P2G4 905 aa11.34□□□□□ -0.59
COPA-202ENST00000368069 RPL36Q9Y3U8 105 aaKnown RBP11.34□□□□□ -0.59
COPA-202ENST00000368069 A0A0U1RQS6 177 aa11.34□□□□□ -0.59
COPA-202ENST00000368069 CHST10O43529 356 aa11.34□□□□□ -0.59
COPA-202ENST00000368069 C6orf47O95873 294 aa11.34□□□□□ -0.59
COPA-202ENST00000368069 BCHEP06276 602 aa11.34□□□□□ -0.59
COPA-202ENST00000368069 GGT1P19440 569 aa11.34□□□□□ -0.59
COPA-202ENST00000368069 XKP51811 444 aa11.34□□□□□ -0.59
COPA-202ENST00000368069 ATP12AP54707 1039 aa11.34□□□□□ -0.59
COPA-202ENST00000368069 TAS2R50P59544 299 aa11.34□□□□□ -0.59
COPA-202ENST00000368069 PRR5P85299 388 aa11.34□□□□□ -0.59
COPA-202ENST00000368069 MORN1Q5T089 497 aa11.34□□□□□ -0.59
COPA-202ENST00000368069 KLHL23Q8NBE8 558 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms