RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 PAPOLBQ9NRJ5 636 aaKnown RBP13.56□□□□□ -0.24
USF1-202ENST00000368020 DYRK1BQ9Y463 629 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 TMEM202A6NGA9 273 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 E7EQ34 232 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 EI24O14681 340 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 EPN2O95208 641 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 PGM3O95394 542 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 TFAP2AP05549 437 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 HOXB9P17482 250 aaPredicted RBP13.56□□□□□ -0.24
USF1-202ENST00000368020 HPCAL1P37235 193 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 RPL3P39023 403 aaKnown RBP13.56□□□□□ -0.24
USF1-202ENST00000368020 GRIA2P42262 883 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 PREPP48147 710 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 ALDH3A2P51648 485 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 ZNF234Q14588 700 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 HIST2H2ACQ16777 129 aaPredicted RBP13.56□□□□□ -0.24
USF1-202ENST00000368020 CNPY1Q3B7I2 92 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 PLA2G4EQ3MJ16 856 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 POM121L1PQ3SYA9 428 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 HIST2H2AA3Q6FI13 130 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 MED27Q6P2C8 311 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 GCNT7Q6ZNI0 430 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 CAMKMTQ7Z624 323 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 PATL1Q86TB9 770 aaKnown RBP13.56□□□□□ -0.24
USF1-202ENST00000368020 ZDHHC13Q8IUH4 622 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 TRAPPC5Q8IUR0 188 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 ADHFE1Q8IWW8 467 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 MSRB3Q8IXL7 192 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 PGBD3Q8N328 593 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 FAM47BQ8NA70 645 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 CLHC1Q8NHS4 586 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 ZFP28Q8NHY6 868 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 CXorf40AQ8TE69 158 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 UBE2E3Q969T4 207 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 SLC47A1Q96FL8 570 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 KXD1Q9BQD3 176 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 PLA2G2FQ9BZM2 168 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 MTG2Q9H4K7 406 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 DCAF13Q9NV06 445 aaKnown RBP13.56□□□□□ -0.24
USF1-202ENST00000368020 SIRT5Q9NXA8 310 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 LIMD1Q9UGP4 676 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 SAMD4AQ9UPU9 718 aaKnown RBP13.56□□□□□ -0.24
USF1-202ENST00000368020 A0A087WXM4 84 aa13.55□□□□□ -0.24
USF1-202ENST00000368020 C2CD4DB7Z1M9 353 aa13.55□□□□□ -0.24
USF1-202ENST00000368020 FOXE1O00358 373 aaPredicted RBP13.55□□□□□ -0.24
USF1-202ENST00000368020 SPINT1O43278 529 aa13.55□□□□□ -0.24
USF1-202ENST00000368020 CCNDBP1O95273 360 aa13.55□□□□□ -0.24
USF1-202ENST00000368020 SOD1P00441 154 aa13.55□□□□□ -0.24
USF1-202ENST00000368020 ALBP02768 609 aa13.55□□□□□ -0.24
USF1-202ENST00000368020 RPN2P04844 631 aa13.55□□□□□ -0.24
USF1-202ENST00000368020 GSTT1P30711 240 aa13.55□□□□□ -0.24
USF1-202ENST00000368020 ANXA8L1Q5VT79 327 aa13.55□□□□□ -0.24
USF1-202ENST00000368020 PTCRAQ6ISU1 281 aaPredicted RBP13.55□□□□□ -0.24
USF1-202ENST00000368020 TTC33Q6PID6 262 aaPredicted RBP13.55□□□□□ -0.24
USF1-202ENST00000368020 ABRAXAS1Q6UWZ7 409 aa13.55□□□□□ -0.24
USF1-202ENST00000368020 SATL1Q86VE3 508 aa13.55□□□□□ -0.24
USF1-202ENST00000368020 TRIML2Q8N7C3 387 aa13.55□□□□□ -0.24
USF1-202ENST00000368020 ZNF366Q8N895 744 aa13.55□□□□□ -0.24
USF1-202ENST00000368020 OR9A1PQ8NGU1 263 aa13.55□□□□□ -0.24
USF1-202ENST00000368020 OR2L2Q8NH16 312 aa13.55□□□□□ -0.24
USF1-202ENST00000368020 MAFAQ8NHW3 353 aaPredicted RBP13.55□□□□□ -0.24
USF1-202ENST00000368020 NCLNQ969V3 563 aa13.55□□□□□ -0.24
USF1-202ENST00000368020 ARRDC3Q96B67 414 aa13.55□□□□□ -0.24
USF1-202ENST00000368020 TRPV5Q9NQA5 729 aa13.55□□□□□ -0.24
USF1-202ENST00000368020 HPS4Q9NQG7 708 aa13.55□□□□□ -0.24
USF1-202ENST00000368020 ITM2BQ9Y287 266 aa13.55□□□□□ -0.24
USF1-202ENST00000368020 TSC22D4Q9Y3Q8 395 aa13.55□□□□□ -0.24
USF1-202ENST00000368020 GMEB1Q9Y692 573 aa13.55□□□□□ -0.24
USF1-202ENST00000368020 PRUNE2Q8WUY3 3088 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 GPR89AB7ZAQ6 455 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 PDLIM1O00151 329 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 NPC1O15118 1278 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 PRAMEF4O60810 478 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 LILRB5O75023 590 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 CREG1O75629 220 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 GPR89BP0CG08 455 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 COX7A2P14406 83 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 CD22P20273 847 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 PEX19P40855 299 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 BDKRB1P46663 353 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 PLIN5Q00G26 463 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 RUNX3Q13761 415 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 GK3PQ14409 553 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 AAK1Q2M2I8 961 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 GAB4Q2WGN9 574 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 ZNF648Q5T619 568 aaPredicted RBP13.54□□□□□ -0.24
USF1-202ENST00000368020 PRAMEF9Q5VWM5 478 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 GALNT18Q6P9A2 607 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 ADAMTSL4Q6UY14 1074 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 DNAJC14Q6Y2X3 702 aaPredicted RBP13.54□□□□□ -0.24
USF1-202ENST00000368020 SYTL1Q8IYJ3 562 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 CFAP206Q8IYR0 622 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 FAM110BQ8TC76 370 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 PNPT1Q8TCS8 783 aaKnown RBP13.54□□□□□ -0.24
USF1-202ENST00000368020 SETD7Q8WTS6 366 aaKnown RBP13.54□□□□□ -0.24
USF1-202ENST00000368020 CYGBQ8WWM9 190 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 C11orf24Q96F05 449 aaPredicted RBP13.54□□□□□ -0.24
USF1-202ENST00000368020 HIC2Q96JB3 615 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 PANX1Q96RD7 426 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 RPP25Q9BUL9 199 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms