RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 C12orf40Q86WS4 652 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 GPSM1Q86YR5 675 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 MICU2Q8IYU8 434 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 STK40Q8N2I9 435 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 PGBD3Q8N328 593 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 PGBD5Q8N414 524 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 MFSD4AQ8N468 514 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.2□□□□□ -0.62
USF1-201ENST00000368019 IL17RCQ8NAC3 791 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 FAR1Q8WVX9 515 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 FCGR1BQ92637 280 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 RORBQ92753 470 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 KCNJ9Q92806 393 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 SEMA3CQ99985 751 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 MGME1Q9BQP7 344 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 TPSD1Q9BZJ3 242 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 AMBRA1Q9C0C7 1298 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 ACTL8Q9H568 366 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 SOX17Q9H6I2 414 aaPredicted RBP11.2□□□□□ -0.62
USF1-201ENST00000368019 ACTR8Q9H981 624 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 PARVBQ9HBI1 364 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 ANKMY1Q9P2S6 941 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 WARS2Q9UGM6 360 aaKnown RBP11.2□□□□□ -0.62
USF1-201ENST00000368019 TRMT6Q9UJA5 497 aaKnown RBP11.2□□□□□ -0.62
USF1-201ENST00000368019 DOLKQ9UPQ8 538 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 MAN2B2Q9Y2E5 1009 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 TIMM22Q9Y584 194 aa11.2□□□□□ -0.62
USF1-201ENST00000368019 DMXL2Q8TDJ6 3036 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 TRBV5-3A0A0A0MS03 114 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 CLDN24A6NM45 220 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 PATE3B3GLJ2 98 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 TAF4O00268 1085 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 LSM1O15116 133 aaKnown RBP11.19□□□□□ -0.62
USF1-201ENST00000368019 GSTA4O15217 222 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 MSI1O43347 362 aaKnown RBP11.19□□□□□ -0.62
USF1-201ENST00000368019 ERN1O75460 977 aaKnown RBP11.19□□□□□ -0.62
USF1-201ENST00000368019 OR4F21O95013 312 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 KAT7O95251 611 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 TSPAN12O95859 305 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 OTCP00480 354 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 CST1P01037 141 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 IGLV3-27P01718 113 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 IL6P05231 212 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 IL7RP16871 459 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 NFKBIAP25963 317 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 UGT2B10P36537 528 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 DCTP40126 519 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 P2RY2P41231 377 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 EIF2B2P49770 351 aaKnown RBP11.19□□□□□ -0.62
USF1-201ENST00000368019 IL2P60568 153 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 MAXP61244 160 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 ECT2LQ008S8 904 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 ZNF235Q14590 738 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 RBBP7Q16576 425 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 HIST2H2ACQ16777 129 aaPredicted RBP11.19□□□□□ -0.62
USF1-201ENST00000368019 DPY19L1Q2PZI1 675 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 ZIK1Q3SY52 487 aaPredicted RBP11.19□□□□□ -0.62
USF1-201ENST00000368019 RUNDC3AQ59EK9 446 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 LRIF1Q5T3J3 769 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 LAIR2Q6ISS4 152 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 CAPN13Q6MZZ7 669 aaPredicted RBP11.19□□□□□ -0.62
USF1-201ENST00000368019 PSAPL1Q6NUJ1 521 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 SHQ1Q6PI26 577 aaKnown RBP11.19□□□□□ -0.62
USF1-201ENST00000368019 PLEKHG7Q6ZR37 379 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 CALHM3Q86XJ0 350 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 IPCEF1Q8WWN9 437 aaPredicted RBP11.19□□□□□ -0.62
USF1-201ENST00000368019 SLC13A3Q8WWT9 602 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 OVCA2Q8WZ82 227 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 NSMCE3Q96MG7 304 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 ZNF300Q96RE9 604 aaPredicted RBP11.19□□□□□ -0.62
USF1-201ENST00000368019 GPR21Q99679 349 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 DCAF13Q9NV06 445 aaKnown RBP11.19□□□□□ -0.62
USF1-201ENST00000368019 SCN3BQ9NY72 215 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 CFAP97Q9P2B7 532 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 INTS6Q9UL03 887 aaKnown RBP11.19□□□□□ -0.62
USF1-201ENST00000368019 EIF3LQ9Y262 564 aaKnown RBP11.19□□□□□ -0.62
USF1-201ENST00000368019 KCTD3Q9Y597 815 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 PCDHB1Q9Y5F3 818 aa11.19□□□□□ -0.62
USF1-201ENST00000368019 ZNF106Q9H2Y7 1883 aaKnown RBP11.19□□□□□ -0.62
USF1-201ENST00000368019 SPEGQ15772 3267 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 A0A1B0GTL3 188 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 A0A1W2PQH9 124 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 NPEPPSL1A6NEC2 478 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 C9JVG2 144 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 NPIPB8E9PQR5 432 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 M0R3G1 203 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 CDC7O00311 574 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 BTN3A1O00481 513 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 CXCR6O00574 342 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 SCAMP3O14828 347 aaKnown RBP11.18□□□□□ -0.62
USF1-201ENST00000368019 KHNYNO15037 678 aaKnown RBP11.18□□□□□ -0.62
USF1-201ENST00000368019 CNTN5O94779 1100 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 ESR1P03372 595 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 APODP05090 189 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 PROS1P07225 676 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 ZDHHC11BP0C7U3 371 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 ACPPP15309 386 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 CSRP1P21291 193 aaKnown RBP11.18□□□□□ -0.62
USF1-201ENST00000368019 S100A1P23297 94 aa11.18□□□□□ -0.62
USF1-201ENST00000368019 TNFRSF4P43489 277 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms