RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 BLOC1S3Q6QNY0 202 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 MRPL10Q7Z7H8 261 aaKnown RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 SLC7A14Q8TBB6 771 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ZFAND1Q8TCF1 268 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 RAB24Q969Q5 203 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 DDIT4LQ96D03 193 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ACP6Q9NPH0 428 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 POT1Q9NUX5 634 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 MED16Q9Y2X0 877 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 SNRPGP15A8MWD9 76 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 KCNAB3O43448 404 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 CYP2A7P20853 494 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 HTR3CQ8WXA8 447 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 LACRTQ9GZZ8 138 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 FBRSQ9HAH7 460 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 AGPAT4Q9NRZ5 378 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 C1orf123Q9NWV4 160 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 HCN2Q9UL51 889 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 DDX3YO15523 660 aaKnown RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 GTF2F2P13984 249 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 SPATC1Q76KD6 591 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 CATSPERDQ86XM0 798 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 OR2T12Q8NG77 320 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 TM9SF4Q92544 642 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 EFCAB11Q9BUY7 163 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 MOCS1Q9NZB8 636 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 RIPK3Q9Y572 518 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 PRKCGP05129 697 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF182P17025 639 aaPredicted RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 LHCGRP22888 699 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 C21orf58P58505 322 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 RETSATQ6NUM9 610 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 AMIGO2Q86SJ2 522 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 DDIASQ8IXT1 998 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 HMX3A6NHT5 357 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 OR2AG2A6NM03 316 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 RIIAD1A6NNX1 92 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF821O75541 412 aaPredicted RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 MATN1P21941 496 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 CAP2P40123 477 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 POLD3Q15054 466 aaPredicted RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 HENMT1Q5T8I9 393 aaKnown RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 SHFQ7M4L6 423 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 MAMDC2Q7Z304 686 aaPredicted RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 CYP4X1Q8N118 509 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 OR1J1Q8NGS3 322 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 C3orf49Q96BT1 292 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 CLCC1Q96S66 551 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 EPYCQ99645 322 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 FARS2O95363 451 aaKnown RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 EPHB2P29323 1055 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 CCR1P32246 355 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 DLSTP36957 453 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 SNTA1Q13424 505 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 PAPOLGQ9BWT3 736 aaKnown RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 SDR39U1Q9NRG7 319 aaPredicted RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 PRR5P85299 388 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 KCNAB2Q13303 367 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ARHGAP19Q14CB8 494 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 HSF5Q4G112 596 aaPredicted RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 FAM46CQ5VWP2 391 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 LRRC55Q6ZSA7 311 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ZFYVE19Q96K21 471 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 MTG1Q9BT17 334 aaPredicted RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF304Q9HCX3 659 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 SLC6A20Q9NP91 592 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 PDP1Q9P0J1 537 aaPredicted RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF391Q9UJN7 358 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 FAM230AA0A1W2PPH8 454 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 EFCAB9A8MZ26 197 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 TRDCB7Z8K6 153 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 CTDNEP1O95476 244 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 HBE1P02100 147 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 APEHP13798 732 aaKnown RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 PMPCAQ10713 525 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 SCARF1Q14162 830 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 OR7G2Q8NG99 324 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 FUNDC2Q9BWH2 189 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ADGRB1O14514 1584 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 TRABD2BA6NFA1 517 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 USP17L5A8MUK1 530 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 NDUFS3O75489 264 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 CSF1RP07333 972 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 BMP3P12645 472 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 MAOBP27338 520 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ACSM2AQ08AH3 577 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 PTPRRQ15256 657 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 BSXQ3C1V8 233 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ACSM2BQ68CK6 577 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 SLC6A19Q695T7 634 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ACOT11Q8WXI4 607 aaPredicted RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF587Q96SQ5 575 aaPredicted RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 GJE1A6NN92 205 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 GABBR2O75899 941 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 RSL1D1O76021 490 aaKnown RBP3.66□□□□□ -1.82
SYNE1-207ENST00000367255 BMP4P12644 408 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 FMO3P31513 532 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 PLK1P53350 603 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 TAS2R50P59544 299 aa3.66□□□□□ -1.82
SYNE1-207ENST00000367255 RAB40BQ12829 278 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms