RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 HNF4AP41235 474 aa19.87■□□□□ 0.77
SHISA4-201ENST00000362011 CASP2P42575 452 aa19.87■□□□□ 0.77
SHISA4-201ENST00000362011 EPHA4P54764 986 aa19.87■□□□□ 0.77
SHISA4-201ENST00000362011 ABATP80404 500 aa19.87■□□□□ 0.77
SHISA4-201ENST00000362011 SIM1P81133 766 aaPredicted RBP19.87■□□□□ 0.77
SHISA4-201ENST00000362011 PRDX1Q06830 199 aaKnown RBP19.87■□□□□ 0.77
SHISA4-201ENST00000362011 COL9A2Q14055 689 aaPredicted RBP19.87■□□□□ 0.77
SHISA4-201ENST00000362011 DOC2AQ14183 400 aa19.87■□□□□ 0.77
SHISA4-201ENST00000362011 E2F2Q14209 437 aa19.87■□□□□ 0.77
SHISA4-201ENST00000362011 SUZ12Q15022 739 aaKnown RBP19.87■□□□□ 0.77
SHISA4-201ENST00000362011 TBCCQ15814 346 aa19.87■□□□□ 0.77
SHISA4-201ENST00000362011 PRAMEF9Q5VWM5 478 aa19.87■□□□□ 0.77
SHISA4-201ENST00000362011 GRHL2Q6ISB3 625 aa19.87■□□□□ 0.77
SHISA4-201ENST00000362011 ARMC6Q6NXE6 501 aa19.87■□□□□ 0.77
SHISA4-201ENST00000362011 KLHL35Q6PF15 583 aa19.87■□□□□ 0.77
SHISA4-201ENST00000362011 NXPE4Q6UWF7 544 aa19.87■□□□□ 0.77
SHISA4-201ENST00000362011 SPATA21Q7Z572 469 aa19.87■□□□□ 0.77
SHISA4-201ENST00000362011 FAM181AQ8N9Y4 354 aa19.87■□□□□ 0.77
SHISA4-201ENST00000362011 OR6C4Q8NGE1 309 aa19.87■□□□□ 0.77
SHISA4-201ENST00000362011 RFWD2Q8NHY2 731 aa19.87■□□□□ 0.77
SHISA4-201ENST00000362011 METTL6Q8TCB7 284 aa19.87■□□□□ 0.77
SHISA4-201ENST00000362011 ZNF473Q8WTR7 871 aaKnown RBP19.87■□□□□ 0.77
SHISA4-201ENST00000362011 WDR34Q96EX3 536 aa19.87■□□□□ 0.77
SHISA4-201ENST00000362011 PTCD3Q96EY7 689 aaKnown RBP19.87■□□□□ 0.77
SHISA4-201ENST00000362011 APOLD1Q96LR9 279 aa19.87■□□□□ 0.77
SHISA4-201ENST00000362011 EHD1Q9H4M9 534 aa19.87■□□□□ 0.77
SHISA4-201ENST00000362011 MRPS30Q9NP92 439 aaKnown RBP19.87■□□□□ 0.77
SHISA4-201ENST00000362011 DNAAF2Q9NVR5 837 aaKnown RBP19.87■□□□□ 0.77
SHISA4-201ENST00000362011 PADI4Q9UM07 663 aa19.87■□□□□ 0.77
SHISA4-201ENST00000362011 TIMM22Q9Y584 194 aa19.87■□□□□ 0.77
SHISA4-201ENST00000362011 PCDHGB2Q9Y5G2 931 aa19.87■□□□□ 0.77
SHISA4-201ENST00000362011 UNC13CQ8NB66 2214 aa19.86■□□□□ 0.77
SHISA4-201ENST00000362011 GSAPA4D1B5 854 aa19.86■□□□□ 0.77
SHISA4-201ENST00000362011 OR5K3A6NET4 321 aa19.86■□□□□ 0.77
SHISA4-201ENST00000362011 MATN2O00339 956 aa19.86■□□□□ 0.77
SHISA4-201ENST00000362011 NDUFAB1O14561 156 aa19.86■□□□□ 0.77
SHISA4-201ENST00000362011 SIGLEC6O43699 453 aa19.86■□□□□ 0.77
SHISA4-201ENST00000362011 SNX3O60493 162 aa19.86■□□□□ 0.77
SHISA4-201ENST00000362011 WFS1O76024 890 aa19.86■□□□□ 0.77
SHISA4-201ENST00000362011 UBXN7O94888 489 aa19.86■□□□□ 0.77
SHISA4-201ENST00000362011 JUPP14923 745 aa19.86■□□□□ 0.77
SHISA4-201ENST00000362011 ALOX15P16050 662 aaPredicted RBP19.86■□□□□ 0.77
SHISA4-201ENST00000362011 AMD1P17707 334 aa19.86■□□□□ 0.77
SHISA4-201ENST00000362011 SF3A3Q12874 501 aaKnown RBP eCLIP19.86■□□□□ 0.77
SHISA4-201ENST00000362011 LAPTM5Q13571 262 aa19.86■□□□□ 0.77
SHISA4-201ENST00000362011 SF1Q15637 639 aaKnown RBP19.86■□□□□ 0.77
SHISA4-201ENST00000362011 PDCD2Q16342 344 aaPredicted RBP19.86■□□□□ 0.77
SHISA4-201ENST00000362011 INAVAQ3KP66 663 aa19.86■□□□□ 0.77
SHISA4-201ENST00000362011 CATSPEREQ5SY80 951 aa19.86■□□□□ 0.77
SHISA4-201ENST00000362011 ZNF438Q7Z4V0 828 aa19.86■□□□□ 0.77
SHISA4-201ENST00000362011 OR2L3Q8NG85 312 aa19.86■□□□□ 0.77
SHISA4-201ENST00000362011 TWIST2Q8WVJ9 160 aa19.86■□□□□ 0.77
SHISA4-201ENST00000362011 EFCAB11Q9BUY7 163 aa19.86■□□□□ 0.77
SHISA4-201ENST00000362011 HRASLS2Q9NWW9 162 aa19.86■□□□□ 0.77
SHISA4-201ENST00000362011 DCTN4Q9UJW0 460 aa19.86■□□□□ 0.77
SHISA4-201ENST00000362011 KCNE1BA0A087WTH5 132 aa19.85■□□□□ 0.77
SHISA4-201ENST00000362011 TRPC5OSA6NMA1 111 aa19.85■□□□□ 0.77
SHISA4-201ENST00000362011 SKAP2O75563 359 aaPredicted RBP19.85■□□□□ 0.77
SHISA4-201ENST00000362011 FKBP9O95302 570 aa19.85■□□□□ 0.77
SHISA4-201ENST00000362011 UGT2B7P16662 529 aa19.85■□□□□ 0.77
SHISA4-201ENST00000362011 TYRP1P17643 537 aa19.85■□□□□ 0.77
SHISA4-201ENST00000362011 SERPINB3P29508 390 aa19.85■□□□□ 0.77
SHISA4-201ENST00000362011 GPR3P46089 330 aa19.85■□□□□ 0.77
SHISA4-201ENST00000362011 UGT3A2Q3SY77 523 aa19.85■□□□□ 0.77
SHISA4-201ENST00000362011 PAGE2BQ5JRK9 111 aa19.85■□□□□ 0.77
SHISA4-201ENST00000362011 PIGWQ7Z7B1 504 aa19.85■□□□□ 0.77
SHISA4-201ENST00000362011 RSC1A1Q92681 617 aa19.85■□□□□ 0.77
SHISA4-201ENST00000362011 OR2A14Q96R47 310 aa19.85■□□□□ 0.77
SHISA4-201ENST00000362011 CUEDC1Q9NWM3 386 aaPredicted RBP19.85■□□□□ 0.77
SHISA4-201ENST00000362011 KCNK4Q9NYG8 393 aa19.85■□□□□ 0.77
SHISA4-201ENST00000362011 SNX6Q9UNH7 406 aa19.85■□□□□ 0.77
SHISA4-201ENST00000362011 TAF4O00268 1085 aa19.84■□□□□ 0.77
SHISA4-201ENST00000362011 ZNF195O14628 629 aa19.84■□□□□ 0.77
SHISA4-201ENST00000362011 FFAR3O14843 346 aa19.84■□□□□ 0.77
SHISA4-201ENST00000362011 GPR42O15529 346 aa19.84■□□□□ 0.77
SHISA4-201ENST00000362011 KRT6AP02538 564 aa19.84■□□□□ 0.77
SHISA4-201ENST00000362011 KRT6BP04259 564 aa19.84■□□□□ 0.77
SHISA4-201ENST00000362011 CD22P20273 847 aa19.84■□□□□ 0.77
SHISA4-201ENST00000362011 HRH2P25021 359 aa19.84■□□□□ 0.77
SHISA4-201ENST00000362011 VARSP26640 1264 aaKnown RBP19.84■□□□□ 0.77
SHISA4-201ENST00000362011 KRT6CP48668 564 aa19.84■□□□□ 0.77
SHISA4-201ENST00000362011 PPM1FP49593 454 aaPredicted RBP19.84■□□□□ 0.77
SHISA4-201ENST00000362011 CCR8P51685 355 aa19.84■□□□□ 0.77
SHISA4-201ENST00000362011 AQP5P55064 265 aa19.84■□□□□ 0.77
SHISA4-201ENST00000362011 BTKQ06187 659 aa19.84■□□□□ 0.77
SHISA4-201ENST00000362011 SLC14A1Q13336 389 aa19.84■□□□□ 0.77
SHISA4-201ENST00000362011 SLBPQ14493 270 aaKnown RBP eCLIP19.84■□□□□ 0.77
SHISA4-201ENST00000362011 NR1D2Q14995 579 aa19.84■□□□□ 0.77
SHISA4-201ENST00000362011 CPSF6Q16630 551 aaKnown RBP eCLIP19.84■□□□□ 0.77
SHISA4-201ENST00000362011 HIST2H2ACQ16777 129 aaPredicted RBP19.84■□□□□ 0.77
SHISA4-201ENST00000362011 SLC5A12Q1EHB4 618 aa19.84■□□□□ 0.77
SHISA4-201ENST00000362011 GKAP1Q5VSY0 366 aaPredicted RBP19.84■□□□□ 0.77
SHISA4-201ENST00000362011 FAM219BQ5XKK7 198 aa19.84■□□□□ 0.77
SHISA4-201ENST00000362011 HIST2H2AA3Q6FI13 130 aa19.84■□□□□ 0.77
SHISA4-201ENST00000362011 ABHD11Q8NFV4 315 aa19.84■□□□□ 0.77
SHISA4-201ENST00000362011 FLVCR1-AS1Q8TAF5 88 aa19.84■□□□□ 0.77
SHISA4-201ENST00000362011 C10orf82Q8WW14 230 aa19.84■□□□□ 0.77
SHISA4-201ENST00000362011 AIF1LQ9BQI0 150 aa19.84■□□□□ 0.77
SHISA4-201ENST00000362011 TMEM120AQ9BXJ8 343 aa19.84■□□□□ 0.77
SHISA4-201ENST00000362011 NUF2Q9BZD4 464 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms