RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 VMACQ2NL98 169 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 SYCE2Q6PIF2 218 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 TP63Q9H3D4 680 aaPredicted RBP13.26□□□□□ -0.29
SGMS1-202ENST00000361781 ARNT2Q9HBZ2 717 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 NKIRAS2Q9NYR9 191 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 TAS2R16Q9NYV7 291 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 SLC38A8A6NNN8 435 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 E2F3O00716 465 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 CD40LGP29965 261 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 GJA5P36382 358 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 HK3P52790 923 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 HSPB3Q12988 150 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 IL18Q14116 193 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 C5orf22Q49AR2 442 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 NOXRED1Q6NXP6 359 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 ERICH5Q6P6B1 374 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 TRIM40Q6P9F5 258 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 ZNF517Q6ZMY9 492 aaPredicted RBP13.26□□□□□ -0.29
SGMS1-202ENST00000361781 CEP68Q76N32 757 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 B3GNT8Q7Z7M8 397 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 GOLM1Q8NBJ4 401 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 FAM83FQ8NEG4 500 aaPredicted RBP13.26□□□□□ -0.29
SGMS1-202ENST00000361781 CSGALNACT1Q8TDX6 532 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 UPF1Q92900 1129 aaKnown RBP eCLIP13.26□□□□□ -0.29
SGMS1-202ENST00000361781 COL26A1Q96A83 441 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 CORO1BQ9BR76 489 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 TMEM246Q9BRR3 403 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 GPR62Q9BZJ7 368 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 RNF167Q9H6Y7 350 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 TM9SF3Q9HD45 589 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 PAQR5Q9NXK6 330 aaPredicted RBP13.26□□□□□ -0.29
SGMS1-202ENST00000361781 VPS29Q9UBQ0 182 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 TMED5Q9Y3A6 229 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 AHDC1Q5TGY3 1603 aaPredicted RBP13.26□□□□□ -0.29
SGMS1-202ENST00000361781 FOCADQ5VW36 1801 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 XIRP1Q702N8 1843 aaKnown RBP13.26□□□□□ -0.29
SGMS1-202ENST00000361781 NOTOA8MTQ0 251 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 NR2F1P10589 423 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 PSKH1P11801 424 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 EPHA2P29317 976 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 MANFP55145 182 aaKnown RBP13.26□□□□□ -0.29
SGMS1-202ENST00000361781 IFI44LQ53G44 452 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 RUNDC3AQ59EK9 446 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 COQ5Q5HYK3 327 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 NFKBIDQ8NI38 313 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 STARD8Q92502 1023 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 SCAMP4Q969E2 229 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 PHOX2BQ99453 314 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 NEURL2Q9BR09 285 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 ZNF222Q9UK12 451 aa13.26□□□□□ -0.29
SGMS1-202ENST00000361781 SBF2Q86WG5 1849 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 TAF1LQ8IZX4 1826 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 FADS2P1A8MWK0 482 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 HHLA1C9JL84 531 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 CTDSP2O14595 271 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 KIAA0513O60268 411 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 SEC14L2O76054 403 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 NPPAP01160 153 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 STATHP02808 62 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 PRPS1L1P21108 318 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 SNRPD1P62314 119 aaKnown RBP13.25□□□□□ -0.29
SGMS1-202ENST00000361781 TBRG1Q3YBR2 411 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 IER5LQ5T953 404 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 TXNDC8Q6A555 127 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 ZNF544Q6NX49 715 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 SNX20Q7Z614 316 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 LMNTD1Q8N9Z9 388 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 AQP11Q8NBQ7 271 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 ARMC5Q96C12 935 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 C1orf74Q96LT6 269 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 RDH12Q96NR8 316 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 UCKL1Q9NWZ5 548 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 SATB2Q9UPW6 733 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 IFNW1P05000 195 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 ITGA2P17301 1181 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 TALDO1P37837 337 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 EPHB3P54753 998 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.25□□□□□ -0.29
SGMS1-202ENST00000361781 SNAPC1Q16533 368 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 CCDC149Q6ZUS6 474 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 TSPAN33Q86UF1 283 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 AUTS2Q8WXX7 1259 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 EXOSC8Q96B26 276 aaKnown RBP13.25□□□□□ -0.29
SGMS1-202ENST00000361781 OR51B5Q9H339 312 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 TRIM45Q9H8W5 580 aaPredicted RBP13.25□□□□□ -0.29
SGMS1-202ENST00000361781 SLC25A13Q9UJS0 675 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 SPIN1Q9Y657 262 aaPredicted RBP13.25□□□□□ -0.29
SGMS1-202ENST00000361781 TMEM88BA6NKF7 163 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 PRR23D1E9PI22 279 aaPredicted RBP13.25□□□□□ -0.29
SGMS1-202ENST00000361781 SLC28A2O43868 658 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 NUDT7P0C024 238 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 PRR23D2P0DMB1 279 aaPredicted RBP13.25□□□□□ -0.29
SGMS1-202ENST00000361781 NR2F6P10588 404 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 NSG1P42857 185 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 PREPP48147 710 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 UGT2B15P54855 530 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 ST8SIA6P61647 398 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 SCN1BQ07699 218 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 GRIK2Q13002 908 aa13.25□□□□□ -0.29
SGMS1-202ENST00000361781 NDUFA5Q16718 116 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms