RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 RNF25Q96BH1 459 aaPredicted RBP5.61□□□□□ -1.51
CDC42SE2-201ENST00000360515 LRRC46Q96FV0 321 aa5.61□□□□□ -1.51
CDC42SE2-201ENST00000360515 CYTH2Q99418 400 aa5.61□□□□□ -1.51
CDC42SE2-201ENST00000360515 TMEM204Q9BSN7 226 aa5.61□□□□□ -1.51
CDC42SE2-201ENST00000360515 PTGFRNQ9P2B2 879 aa5.61□□□□□ -1.51
CDC42SE2-201ENST00000360515 PPT2Q9UMR5 302 aa5.61□□□□□ -1.51
CDC42SE2-201ENST00000360515 EFR3BQ9Y2G0 817 aa5.61□□□□□ -1.51
CDC42SE2-201ENST00000360515 GTF3C1Q12789 2109 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 CFAP99D6REC4 459 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 PPP1R12AO14974 1030 aaPredicted RBP5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 MATN4O95460 622 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 ZNF24P17028 368 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 SKIV2L2P42285 1042 aaKnown RBP5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 ARHGAP25P42331 645 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 C1orf189Q5VU69 101 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 ZNF449Q6P9G9 518 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 IQCDQ96DY2 449 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 CALHM2Q9HA72 323 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 DNAJC16Q9Y2G8 782 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 NBASA2RRP1 2371 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 NKX2-6A6NCS4 301 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 EPPINO95925 133 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 SLC26A5P58743 744 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 TMEM214Q6NUQ4 689 aaKnown RBP5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 DEF8Q6ZN54 512 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 TTLL10Q6ZVT0 673 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 KIF18BQ86Y91 864 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 OR2L3Q8NG85 312 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 RBM41Q96IZ5 413 aaKnown RBP5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 SEC16BQ96JE7 1060 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 QKIQ96PU8 341 aaKnown RBP eCLIP5.6□□□□□ -1.512e-6■□□□□ 11
CDC42SE2-201ENST00000360515 VN1R1Q9GZP7 353 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.6□□□□□ -1.517e-7■■■■□ 20.8
CDC42SE2-201ENST00000360515 SOX17Q9H6I2 414 aaPredicted RBP5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 MXRA5Q9NR99 2828 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 GOLGA8QA0A0J9YX86 632 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 GOLGA8OA6NCC3 632 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 AHRRA9YTQ3 701 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 GOLGA8NF8WBI6 632 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 GOLGA8RI6L899 631 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 OVOL3O00110 214 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 ABCB7O75027 752 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 PROSCO94903 275 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 CCNDBP1O95273 360 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 MT-CYBP00156 380 aaPredicted RBP5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 SNRPB2P08579 225 aaKnown RBP5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 C8orf89P0DMQ9 161 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 TCF4P15884 667 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 CD9P21926 228 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 UGT1A1P22309 533 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 KDELR1P24390 212 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 SYCP1Q15431 976 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 CD163Q86VB7 1156 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 LRRC6Q86X45 466 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 LACC1Q8IV20 430 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 MAP7D3Q8IWC1 876 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 COPS8Q99627 209 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 EBNA1BP2Q99848 306 aaKnown RBP5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 GPATCH1Q9BRR8 931 aaKnown RBP5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 SLC7A5P2Q9GIP4 190 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 KLHL25Q9H0H3 589 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 PIGMQ9H3S5 423 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 LIME1Q9H400 295 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 UVRAGQ9P2Y5 699 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 PKP3Q9Y446 797 aa5.6□□□□□ -1.51
CDC42SE2-201ENST00000360515 ANKRD33BA6NCL7 494 aa5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 LRRC14BA6NHZ5 514 aa5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 SAGE2PA6NJ88 616 aa5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 FIGNL2A6NMB9 653 aa5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 CDK11BP21127 795 aaKnown RBP5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 PMP22Q01453 160 aa5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 SF3B4Q15427 424 aaKnown RBP eCLIP5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 CEBPEQ15744 281 aa5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 WASHC2DQ5SRD0 308 aa5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 KAZNQ674X7 775 aa5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 MEX3DQ86XN8 651 aaKnown RBP5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 KLHDC8AQ8IYD2 350 aa5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 CFAP206Q8IYR0 622 aa5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 FAM109AQ8N4B1 249 aa5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 SPDYE1Q8NFV5 336 aaPredicted RBP5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 GOT1L1Q8NHS2 421 aaPredicted RBP5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 GBA3Q9H227 469 aa5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 SUDS3Q9H7L9 328 aaPredicted RBP5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 PLEKHA6Q9Y2H5 1048 aa5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 BZW2Q9Y6E2 419 aaKnown RBP5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 IGKV1-8A0A0C4DH67 115 aa5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 USP27XA6NNY8 438 aa5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 HCRTR2O43614 444 aa5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 MTX2O75431 263 aa5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 FAM157CP0CG43 387 aa5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 SMIM10L1P0DMW3 83 aa5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 WNT3AP56704 352 aa5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 GBE1Q04446 702 aa5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 DMTNQ08495 405 aa5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 TRIM14Q14142 442 aa5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 RPS6KA1Q15418 735 aa5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 ADGRD1Q6QNK2 874 aa5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.59□□□□□ -1.51
CDC42SE2-201ENST00000360515 OR5AR1Q8NGP9 310 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms