RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 IL4I1Q96RQ9 567 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 EBPLQ9BY08 206 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 PPIL3Q9H2H8 161 aaKnown RBP12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 MMP27Q9H306 513 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 A0A1W2PPW3 197 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 TLR5O60602 858 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 SOX30O94993 753 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 OAZ2O95190 189 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 IFNA4P05014 189 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 CLCN4P51793 760 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 CREB5Q02930 508 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 TLE3Q04726 772 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 CLCQ05315 142 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 LCP2Q13094 533 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 TMEM236Q5W0B7 351 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 CEP97Q8IW35 865 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 PDZD9Q8IXQ8 264 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 ZBTB2Q8N680 514 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 NAT16Q8N8M0 369 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 ITM2CQ9NQX7 267 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 SH2B3Q9UQQ2 575 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 HHLA1C9JL84 531 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 INMT-MINDY4F8WBC2 141 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 EVI2BP34910 448 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 HOXD12P35452 270 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 POLR2HP52434 150 aaKnown RBP12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 GNMTQ14749 295 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 COL28A1Q2UY09 1125 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 ZNF792Q3KQV3 632 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 CLEC12AQ5QGZ9 265 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 PHF13Q86YI8 300 aaPredicted RBP12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 HSBP1L1C9JCN9 74 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 EPHB6O15197 1021 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 RNASEH2AO75792 299 aaKnown RBP12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 IFNA10P01566 189 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 OR12D2P58182 307 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 RPS3AP61247 264 aaKnown RBP12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 BCL2A1Q16548 175 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 KCNJ9Q92806 393 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 PLD4Q96BZ4 506 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 PKP2Q99959 881 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 KATNBL1Q9H079 304 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 ZNF334Q9HCZ1 680 aaPredicted RBP12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 PCDHB3Q9Y5E6 796 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 SHROOM3Q8TF72 1996 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 BMP6P22004 513 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 UGT2B10P36537 528 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 NSG1P42857 185 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 CRYBB1P53674 252 aaPredicted RBP12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 CRISP3P54108 245 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 PPIGQ13427 754 aaKnown RBP eCLIP12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 MAP4K3Q8IVH8 894 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 SLC22A15Q8IZD6 547 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 OR10G2Q8NGC3 310 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 RIOX1Q9H6W3 641 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 TLE6Q9H808 572 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 TRIM36Q9NQ86 728 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 ADAM18Q9Y3Q7 739 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 AIPO00170 330 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 PIP5K1BO14986 540 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 POLR1CO15160 346 aaPredicted RBP12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 DNASE1P24855 282 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 EDNRAP25101 427 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 RARRES1P49788 294 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 SPATS1Q496A3 300 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 GPC2Q8N158 579 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 DCBLD1Q8N8Z6 715 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 KIAA1143Q96AT1 154 aaPredicted RBP12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 PARPBPQ9NWS1 579 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 RGL2O15211 777 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 SLITRK3O94933 977 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 TPSB2P20231 275 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 TPSAB1Q15661 275 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 POM121L1PQ3SYA9 428 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 C10orf62Q5T681 223 aaPredicted RBP12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 GPRC6AQ5T6X5 926 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 ZNF529Q6P280 563 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 EXOSC8Q96B26 276 aaKnown RBP12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 PGAP3Q96FM1 320 aaPredicted RBP12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 GPR88Q9GZN0 384 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 CDT1Q9H211 546 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 TMEM45AQ9NWC5 275 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 ZNF175Q9Y473 711 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 AQP12BA6NM10 295 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 NEDD8-MDP1E9PL57 170 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 ITM2AO43736 263 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 POP4O95707 220 aaKnown RBP12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 XRCC1P18887 633 aaPredicted RBP12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 GBE1Q04446 702 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 FADDQ13158 208 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 C9orf131Q5VYM1 1079 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 AQP12AQ8IXF9 295 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 MFSD2AQ8NA29 543 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 FCAMRQ8WWV6 532 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 SLA2Q9H6Q3 261 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 ANXA4P09525 319 aaPredicted RBP12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 PTPRAP18433 802 aa12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 SMAD3P84022 425 aaKnown RBP12.88□□□□□ -0.35
SRGAP3-201ENST00000360413 HSPB3Q12988 150 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms