RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 ARSHQ5FYA8 562 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 PITRM1Q5JRX3 1037 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 GPR21Q99679 349 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 BTBD1Q9H0C5 482 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 MEPEQ9NQ76 525 aaPredicted RBP9.07□□□□□ -0.96
VPS13A-203ENST00000360280 DERAQ9Y315 318 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 DNAJB5O75953 348 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 NCS1P62166 190 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 CYCSP99999 105 aaKnown RBP9.07□□□□□ -0.96
VPS13A-203ENST00000360280 DAG1Q14118 895 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 EML3Q32P44 896 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 GPRC6AQ5T6X5 926 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 FSTL4Q6MZW2 842 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 SLC9A9Q8IVB4 645 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 TERB2Q8NHR7 220 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 ADAM2Q99965 735 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 PDCD2LQ9BRP1 358 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 VNN3Q9NY84 501 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 ABCB7O75027 752 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 HSD11B2P80365 405 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 BNIP3Q12983 259 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 ENAMQ9NRM1 1142 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 TIMM22Q9Y584 194 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 SHROOM3Q8TF72 1996 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 EPHB6O15197 1021 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 XPNPEP2O43895 674 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 OR2B3O76000 313 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 NDST3O95803 873 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 PRNPP04156 253 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 SGCBQ16585 318 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 FAM46DQ8NEK8 389 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 LCN9Q8WX39 176 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 ZNF514Q96K75 400 aaPredicted RBP9.07□□□□□ -0.96
VPS13A-203ENST00000360280 OR14A2Q96R54 314 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 CCR8P51685 355 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 ARL9Q6T311 187 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 IGFLR1Q9H665 355 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 ARHGEF28Q8N1W1 1705 aaKnown RBP9.07□□□□□ -0.96
VPS13A-203ENST00000360280 APOC3P02656 99 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 PRPS1L1P21108 318 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 SMAD3P84022 425 aaKnown RBP9.07□□□□□ -0.96
VPS13A-203ENST00000360280 BATFQ16520 125 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 LRRC66Q68CR7 880 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 FOXR2Q6PJQ5 311 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 PIGZQ86VD9 579 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 NUDT13Q86X67 352 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 TMEM41AQ96HV5 264 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 LRRC10BA6NIK2 292 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 PI15O43692 258 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 CDRT1O95170 752 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 SLC34A2O95436 690 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 PAK4O96013 591 aaPredicted RBP9.07□□□□□ -0.96
VPS13A-203ENST00000360280 MON1AQ86VX9 555 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 ARHGAP12Q8IWW6 846 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 TMEM203Q969S6 136 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 MAPKAP1Q9BPZ7 522 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 CLCA3PQ9Y6N3 262 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 OAZ2O95190 189 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 MATN1P21941 496 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 PRKXP51817 358 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 ATXN7L3Q14CW9 347 aaPredicted RBP9.07□□□□□ -0.96
VPS13A-203ENST00000360280 NTRK3Q16288 839 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 TMEM69Q5SWH9 247 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 TTYH2Q9BSA4 534 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 OSER1Q9NX31 292 aa9.07□□□□□ -0.96
VPS13A-203ENST00000360280 H1F0P07305 194 aaKnown RBP9.06□□□□□ -0.96
VPS13A-203ENST00000360280 SLC1A5Q15758 541 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 THEM6Q8WUY1 208 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 VWDEQ8N2E2 1590 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 FBXO15Q8NCQ5 510 aaPredicted RBP9.06□□□□□ -0.96
VPS13A-203ENST00000360280 SHC3Q92529 594 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 ZNF641Q96N77 438 aaPredicted RBP9.06□□□□□ -0.96
VPS13A-203ENST00000360280 TCAF1Q9Y4C2 921 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 AGPSO00116 658 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 PLATP00750 562 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 ACTA2P62736 377 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 ACTG2P63267 376 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 TMEM246Q9BRR3 403 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 RTFDC1Q9BY42 306 aaPredicted RBP9.06□□□□□ -0.96
VPS13A-203ENST00000360280 PTPRJQ12913 1337 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 PIP5K1BO14986 540 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 PCCBP05166 539 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 FSCN2O14926 492 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 BCAS1O75363 584 aaPredicted RBP9.06□□□□□ -0.96
VPS13A-203ENST00000360280 RPP14O95059 124 aaKnown RBP9.06□□□□□ -0.96
VPS13A-203ENST00000360280 FAM198BQ6UWH4 519 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 FAM86B1Q8N7N1 296 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 FN3KQ9H479 309 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 GRHPRQ9UBQ7 328 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 KCNS2Q9ULS6 477 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 PTPN6P29350 595 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 GTF2BQ00403 316 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 CTC1Q2NKJ3 1217 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 CENPSQ8N2Z9 138 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 TEX19Q8NA77 164 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 TMEM100Q9NV29 134 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 EXOSC1Q9Y3B2 195 aaKnown RBP9.06□□□□□ -0.96
VPS13A-203ENST00000360280 GXYLT2A0PJZ3 443 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 OTOL1A6NHN0 477 aaPredicted RBP9.06□□□□□ -0.96
VPS13A-203ENST00000360280 IDH3GP51553 393 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms