RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 VNN1O95497 513 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 CSTBP04080 98 aaKnown RBP17.92■□□□□ 0.46
SHANK1-202ENST00000359082 PIM3Q86V86 326 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 Q8N9G6 341 aaPredicted RBP17.92■□□□□ 0.46
SHANK1-202ENST00000359082 ZSCAN5AQ9BUG6 496 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 ILVBLA1L0T0 632 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 OR6C70A6NIJ9 312 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 M0R036 132 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 PDLIM1O00151 329 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 CLIC1O00299 241 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 JUNP05412 331 aaKnown RBP17.91■□□□□ 0.46
SHANK1-202ENST00000359082 RPS24P62847 133 aaKnown RBP17.91■□□□□ 0.46
SHANK1-202ENST00000359082 RPL6Q02878 288 aaKnown RBP17.91■□□□□ 0.46
SHANK1-202ENST00000359082 SLC2A7Q6PXP3 512 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 SSX6Q7RTT6 188 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 MINDY2Q8NBR6 621 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 ZC3H10Q96K80 434 aaKnown RBP17.91■□□□□ 0.46
SHANK1-202ENST00000359082 TREM1Q9NP99 234 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 FXYD6-FXYD2A0A087WZ82 144 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 INHAP05111 366 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 ADH5P11766 374 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 PTNP21246 168 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 LHCGRP22888 699 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 HCAR3P49019 387 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 CHRNA6Q15825 494 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 TLCD1Q96CP7 247 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 SLC7A6OSQ96CW6 309 aaPredicted RBP17.91■□□□□ 0.46
SHANK1-202ENST00000359082 CAMK1GQ96NX5 476 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 FXYD6Q9H0Q3 95 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 PTTG2Q9NZH5 202 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 OAZ2O95190 189 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 C8orf89P0DMQ9 161 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 ANXA8P13928 327 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 CREB1P16220 341 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 CCNOP22674 350 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 DAG1Q14118 895 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 TIGD5Q53EQ6 642 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 SPIN4Q56A73 249 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 THOC6Q86W42 341 aaKnown RBP17.91■□□□□ 0.46
SHANK1-202ENST00000359082 C1orf52Q8N6N3 182 aaKnown RBP17.91■□□□□ 0.46
SHANK1-202ENST00000359082 C13orf42A0A1B0GVH6 325 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 SLC6A4P31645 630 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 PTGS2P35354 604 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 SLC10A6Q3KNW5 377 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 SYPL2Q5VXT5 272 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 TMBIM1Q969X1 311 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 EBF2Q9HAK2 575 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 HCKP08631 526 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 ATP1B2P14415 290 aaPredicted RBP17.91■□□□□ 0.46
SHANK1-202ENST00000359082 PRPS1L1P21108 318 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 DPY19L1Q2PZI1 675 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 C1orf94Q6P1W5 598 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 SNX29P2Q8IUI4 249 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 GEMIN6Q8WXD5 167 aaKnown RBP17.91■□□□□ 0.46
SHANK1-202ENST00000359082 STON2Q8WXE9 905 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 SLC22A18Q96BI1 424 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 HAPLN3Q96S86 360 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 OSBPL2Q9H1P3 480 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 VNN3Q9NY84 501 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 GMEB2Q9UKD1 530 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 SLC22A14Q9Y267 594 aa17.91■□□□□ 0.46
SHANK1-202ENST00000359082 CAPN14A8MX76 684 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 ENTPD6O75354 484 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 VNN2O95498 520 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 ITGA5P08648 1049 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 RBM34P42696 430 aaKnown RBP17.9■□□□□ 0.46
SHANK1-202ENST00000359082 SYT16Q17RD7 645 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 DUOXA1Q1HG43 343 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 NCBP2-AS2Q69YL0 99 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 PAMR1Q6UXH9 720 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 PAQR7Q86WK9 346 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 OR2L2Q8NH16 312 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 NCSTNQ92542 709 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 LDAHQ9H6V9 325 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 OXSMQ9NWU1 459 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 C2orf92A0A1B0GVN3 265 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 MUSKO15146 869 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 SLC22A2O15244 555 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 NUAK1O60285 661 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 IFNA21P01568 189 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 GDI1P31150 447 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 MECP2P51608 486 aaKnown RBP17.9■□□□□ 0.46
SHANK1-202ENST00000359082 PHC1P78364 1004 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 LYSMD3Q7Z3D4 306 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 TMEM139Q8IV31 216 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 C10orf82Q8WW14 230 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 GKN1Q9NS71 199 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 TMEM233B4DJY2 109 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 H0YGN5 161 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 CBLP22681 906 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 WFIKKN2Q8TEU8 576 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 ITPAQ9BY32 194 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 UCK2Q9BZX2 261 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 THUMPD1Q9NXG2 353 aaKnown RBP17.9■□□□□ 0.46
SHANK1-202ENST00000359082 POFUT2Q9Y2G5 429 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 TRBC2A0A5B9 178 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 FAM170BA6NMN3 283 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 RPL10P27635 214 aaKnown RBP17.9■□□□□ 0.46
SHANK1-202ENST00000359082 MBLAC2Q68D91 279 aa17.9■□□□□ 0.46
SHANK1-202ENST00000359082 RAB12Q6IQ22 244 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms