RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 CDADC1Q9BWV3 514 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 RBCK1Q9BYM8 510 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 ELL3Q9HB65 397 aaPredicted RBP5.92□□□□□ -1.46
VPS13B-203ENST00000358544 CD300AQ9UGN4 299 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 NUBP2Q9Y5Y2 271 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 DOCK3Q8IZD9 2030 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 ENDOD1O94919 500 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 NPPAP01160 153 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 H1F0P07305 194 aaKnown RBP5.92□□□□□ -1.46
VPS13B-203ENST00000358544 GSTM3P21266 225 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 PDHA2P29803 388 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 TARDBPQ13148 414 aaKnown RBP eCLIP5.92□□□□□ -1.463e-6■■■□□ 18.6
VPS13B-203ENST00000358544 MAP1SQ66K74 1059 aaPredicted RBP5.92□□□□□ -1.46
VPS13B-203ENST00000358544 ELP2Q6IA86 826 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 MSANTD2Q6P1R3 559 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 OR10Q1Q8NGQ4 319 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 SLC5A11Q8WWX8 675 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 LENG9Q96B70 501 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 PSKH2Q96QS6 385 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 KXD1Q9BQD3 176 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 PDCD2LQ9BRP1 358 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 MCMBPQ9BTE3 642 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 LGR4Q9BXB1 951 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 A3GALT2U3KPV4 340 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 PRSS51A0A1B0GVH4 220 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 PRSS44E7EML9 344 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 HK1P19367 917 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 CDH8P55286 799 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 OR4D2P58180 307 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 ADAM8P78325 824 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 LYPLAL1Q5VWZ2 237 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 SIGIRRQ6IA17 410 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 BTBD1Q9H0C5 482 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 TNFSF13BQ9Y275 285 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 SPTBN4Q9H254 2564 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 SLC7A4O43246 635 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 IFNA17P01571 189 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 CES1P23141 567 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 CHMP24386 653 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 HTR1EP28566 365 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 S100GP29377 79 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 OR3A3P47888 321 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 MRPS5P82675 430 aaKnown RBP5.92□□□□□ -1.46
VPS13B-203ENST00000358544 CDK10Q15131 360 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 OR8J3Q8NGG0 315 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 SNX33Q8WV41 574 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 CPNE2Q96FN4 548 aaPredicted RBP5.92□□□□□ -1.46
VPS13B-203ENST00000358544 SORT1Q99523 831 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 ABCG5Q9H222 651 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 TNKS2Q9H2K2 1166 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 YDJCA8MPS7 323 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 IFNA10P01566 189 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 HLA-DQA2P01906 255 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 IFNA4P05014 189 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 LCKP06239 509 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 RPS2P15880 293 aaKnown RBP5.92□□□□□ -1.46
VPS13B-203ENST00000358544 MLLT3P42568 568 aaPredicted RBP5.92□□□□□ -1.46
VPS13B-203ENST00000358544 DSC2Q02487 901 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 C2orf80Q0P641 193 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 FAM205BPQ63HN1 556 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 LYSMD3Q7Z3D4 306 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 PIGZQ86VD9 579 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 SP8Q8IXZ3 490 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 RAVER1Q8IY67 606 aaKnown RBP5.92□□□□□ -1.46
VPS13B-203ENST00000358544 PYROXD2Q8N2H3 581 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 TMEM151AQ8N4L1 468 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 SLC7A5P2Q9GIP4 190 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 MTG2Q9H4K7 406 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 FAM124BQ9H5Z6 455 aaPredicted RBP5.92□□□□□ -1.46
VPS13B-203ENST00000358544 ASF1AQ9Y294 204 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 DICER1Q9UPY3 1922 aaKnown RBP5.92□□□□□ -1.46
VPS13B-203ENST00000358544 FHP07954 510 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 ENGP17813 658 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 EIF2DP41214 584 aaKnown RBP5.92□□□□□ -1.46
VPS13B-203ENST00000358544 NRLP54845 237 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 EN1Q05925 392 aaPredicted RBP5.92□□□□□ -1.46
VPS13B-203ENST00000358544 PPP1R8Q12972 351 aaKnown RBP5.92□□□□□ -1.46
VPS13B-203ENST00000358544 NAE1Q13564 534 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 TSTD2Q5T7W7 516 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 RTL4Q6ZR62 310 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 FTMTQ8N4E7 242 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 ZBTB44Q8NCP5 570 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 SETD6Q8TBK2 473 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 METTL8Q9H825 291 aaKnown RBP5.92□□□□□ -1.46
VPS13B-203ENST00000358544 MIOSQ9NXC5 875 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 NFASCO94856 1347 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 TVP23AA6NH52 213 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 E7ESA3 106 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 CATP04040 527 aaKnown RBP5.92□□□□□ -1.46
VPS13B-203ENST00000358544 RPL10P27635 214 aaKnown RBP5.92□□□□□ -1.46
VPS13B-203ENST00000358544 PTPN6P29350 595 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 GMPRP36959 345 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 LEPRP48357 1165 aaKnown RBP5.92□□□□□ -1.46
VPS13B-203ENST00000358544 KHKP50053 298 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 STEAP4Q687X5 459 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 INTS5Q6P9B9 1019 aaKnown RBP5.92□□□□□ -1.46
VPS13B-203ENST00000358544 TXNRD3Q86VQ6 643 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 METTL4Q8N3J2 472 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 ACDQ96AP0 544 aa5.92□□□□□ -1.46
VPS13B-203ENST00000358544 PCDHGB1Q9Y5G3 927 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms