RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 CES4AQ5XG92 561 aa14.27□□□□□ -0.12
CCNE1-202ENST00000357943 FRMD7Q6ZUT3 714 aa14.27□□□□□ -0.12
CCNE1-202ENST00000357943 FAM129CQ86XR2 697 aa14.27□□□□□ -0.12
CCNE1-202ENST00000357943 MARCH9Q86YJ5 346 aa14.27□□□□□ -0.12
CCNE1-202ENST00000357943 ZNF740Q8NDX6 193 aa14.27□□□□□ -0.12
CCNE1-202ENST00000357943 OR4K1Q8NGD4 311 aa14.27□□□□□ -0.12
CCNE1-202ENST00000357943 OR6Y1Q8NGX8 325 aa14.27□□□□□ -0.12
CCNE1-202ENST00000357943 PRR11Q96HE9 360 aaPredicted RBP14.27□□□□□ -0.12
CCNE1-202ENST00000357943 DEPDC7Q96QD5 511 aa14.27□□□□□ -0.12
CCNE1-202ENST00000357943 CAPS2Q9BXY5 557 aa14.27□□□□□ -0.12
CCNE1-202ENST00000357943 TMEM184CQ9NVA4 438 aa14.27□□□□□ -0.12
CCNE1-202ENST00000357943 SOHLH2Q9NX45 425 aa14.27□□□□□ -0.12
CCNE1-202ENST00000357943 FREM2Q5SZK8 3169 aa14.27□□□□□ -0.13
CCNE1-202ENST00000357943 FEZF1A0PJY2 475 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 FAM149AA5PLN7 773 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 HAT1O14929 419 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 CLGNO14967 610 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 WFS1O76024 890 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 C1GALT1C1LP0DN25 315 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 BGNP21810 368 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 ATP1A2P50993 1020 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 CCR8P51685 355 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 CCNG1P51959 295 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 SH3BP2P78314 561 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 HSD11B2P80365 405 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 IRF8Q02556 426 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 DOC2AQ14183 400 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 CHI3L2Q15782 390 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 FAM219BQ5XKK7 198 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 ATG9BQ674R7 924 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 FBXO42Q6P3S6 717 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 ATG14Q6ZNE5 492 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 KMT5CQ86Y97 462 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 D2HGDHQ8N465 521 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 CHCHD4Q8N4Q1 142 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 SREK1Q8WXA9 508 aaKnown RBP14.26□□□□□ -0.13
CCNE1-202ENST00000357943 ATP6V1E2Q96A05 226 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 TCTN2Q96GX1 697 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 SYNPO2LQ9H987 977 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 PELI2Q9HAT8 420 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 PDE7BQ9NP56 450 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 GEMIN8Q9NWZ8 242 aaKnown RBP14.26□□□□□ -0.13
CCNE1-202ENST00000357943 ZNF225Q9UK10 706 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 SNX7Q9UNH6 387 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 BTRCQ9Y297 605 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 UBFD1O14562 309 aaKnown RBP14.26□□□□□ -0.13
CCNE1-202ENST00000357943 EBLN1P0CF75 366 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 NEFHP12036 1026 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 JUPP14923 745 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 FOLR1P15328 257 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 HRH2P25021 359 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 ARRB2P32121 409 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 ARL1P40616 181 aaPredicted RBP14.26□□□□□ -0.13
CCNE1-202ENST00000357943 MLLT3P42568 568 aaPredicted RBP14.26□□□□□ -0.13
CCNE1-202ENST00000357943 ARL4DP49703 201 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 PCDH1Q08174 1060 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 ASPHQ12797 758 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 LCP2Q13094 533 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 TRAF3Q13114 568 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 TARDBPQ13148 414 aaKnown RBP eCLIP14.26□□□□□ -0.13
CCNE1-202ENST00000357943 E2F2Q14209 437 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 RBBP7Q16576 425 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 DEFB110Q30KQ9 67 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 TMPRSS12Q86WS5 348 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 PPP1R14CQ8TAE6 165 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 WDR34Q96EX3 536 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 NTMT1Q9BV86 223 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 SHCBP1LQ9BZQ2 653 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 EHD1Q9H4M9 534 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 ACTR8Q9H981 624 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 OCIAD1Q9NX40 245 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 ANKMY1Q9P2S6 941 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 PILRAQ9UKJ1 303 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 RNF11Q9Y3C5 154 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 CELSR3Q9NYQ7 3312 aa14.26□□□□□ -0.13
CCNE1-202ENST00000357943 A0A0J9YVX5 310 aa14.25□□□□□ -0.13
CCNE1-202ENST00000357943 HGSO14964 777 aaPredicted RBP14.25□□□□□ -0.13
CCNE1-202ENST00000357943 LCMT2O60294 686 aaKnown RBP14.25□□□□□ -0.13
CCNE1-202ENST00000357943 MLYCDO95822 493 aa14.25□□□□□ -0.13
CCNE1-202ENST00000357943 CHRNGP07510 517 aa14.25□□□□□ -0.13
CCNE1-202ENST00000357943 CTSBP07858 339 aa14.25□□□□□ -0.13
CCNE1-202ENST00000357943 CSTF2P33240 577 aaKnown RBP eCLIP14.25□□□□□ -0.13
CCNE1-202ENST00000357943 CASP2P42575 452 aa14.25□□□□□ -0.13
CCNE1-202ENST00000357943 ERVPABLB-1P60509 514 aa14.25□□□□□ -0.13
CCNE1-202ENST00000357943 CYP4F3Q08477 520 aa14.25□□□□□ -0.13
CCNE1-202ENST00000357943 SLBPQ14493 270 aaKnown RBP eCLIP14.25□□□□□ -0.13
CCNE1-202ENST00000357943 NAA25Q14CX7 972 aa14.25□□□□□ -0.13
CCNE1-202ENST00000357943 TBCCQ15814 346 aa14.25□□□□□ -0.13
CCNE1-202ENST00000357943 LETMD1Q6P1Q0 360 aa14.25□□□□□ -0.13
CCNE1-202ENST00000357943 RNF44Q7L0R7 432 aa14.25□□□□□ -0.13
CCNE1-202ENST00000357943 MYLK4Q86YV6 388 aaPredicted RBP14.25□□□□□ -0.13
CCNE1-202ENST00000357943 LSMEM2Q8N112 164 aa14.25□□□□□ -0.13
CCNE1-202ENST00000357943 DNAJC22Q8N4W6 341 aa14.25□□□□□ -0.13
CCNE1-202ENST00000357943 AGBL5Q8NDL9 886 aa14.25□□□□□ -0.13
CCNE1-202ENST00000357943 OR4F6Q8NGB9 312 aa14.25□□□□□ -0.13
CCNE1-202ENST00000357943 PTCD3Q96EY7 689 aaKnown RBP14.25□□□□□ -0.13
CCNE1-202ENST00000357943 CMKLR1Q99788 373 aa14.25□□□□□ -0.13
CCNE1-202ENST00000357943 CHRNA10Q9GZZ6 450 aa14.25□□□□□ -0.13
CCNE1-202ENST00000357943 INTS9Q9NV88 658 aaKnown RBP14.25□□□□□ -0.13
CCNE1-202ENST00000357943 A0A1W2PNU3 283 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms