RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 SMN1Q16637 294 aaKnown RBP10.34□□□□□ -0.75
CAPN3-205ENST00000357568 SYT16Q17RD7 645 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 SPANXN4Q5MJ08 99 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 PIK3R6Q5UE93 754 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 GCNT7Q6ZNI0 430 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 EIF3MQ7L2H7 374 aaKnown RBP10.34□□□□□ -0.75
CAPN3-205ENST00000357568 CACTIN-AS1Q8N1I8 211 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 C1orf52Q8N6N3 182 aaKnown RBP10.34□□□□□ -0.75
CAPN3-205ENST00000357568 DBF4BQ8NFT6 615 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 OR13C4Q8NGS5 318 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 CD200R1Q8TD46 325 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 JPH3Q8WXH2 748 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-205ENST00000357568 TESCQ96BS2 214 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 SLC39A13Q96H72 371 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 HHIPQ96QV1 700 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 TBCDQ9BTW9 1192 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 RNF39Q9H2S5 420 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 REEP1Q9H902 201 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 SERHLQ9NQF3 203 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 U3KQV3 271 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 J3KR12 359 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 ESR1P03372 595 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 PRPS2P11908 318 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 ERP29P30040 261 aaKnown RBP10.34□□□□□ -0.75
CAPN3-205ENST00000357568 RPL9P32969 192 aaKnown RBP10.34□□□□□ -0.75
CAPN3-205ENST00000357568 CLDN8P56748 225 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 MAXP61244 160 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 MLLT1Q03111 559 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-205ENST00000357568 ASAH1Q13510 395 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 ABRAXAS2Q15018 415 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 PRSS36Q5K4E3 855 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-205ENST00000357568 PLCZ1Q86YW0 608 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 TCTE3Q8IZS6 198 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 PGBD5Q8N414 524 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 HERVK_113Q902F9 699 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 LINGO1Q96FE5 620 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 PKMYT1Q99640 499 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 CDCA4Q9BXL8 241 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 TMEM245Q9H330 911 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 ELAC1Q9H777 363 aaKnown RBP10.34□□□□□ -0.75
CAPN3-205ENST00000357568 SYNDIG1Q9H7V2 258 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 STMN3Q9NZ72 180 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 ABCG2Q9UNQ0 655 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 FAM50BQ9Y247 325 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 TLR6Q9Y2C9 796 aa10.34□□□□□ -0.75
CAPN3-205ENST00000357568 TMA7Q9Y2S6 64 aaKnown RBP10.34□□□□□ -0.75
CAPN3-205ENST00000357568 ARIH1Q9Y4X5 557 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-205ENST00000357568 A6NL46 340 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 FGBP02675 491 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 ALPPP05187 535 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 ADORA3P0DMS8 318 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 IL7P13232 177 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 CYP4B1P13584 511 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 SYN1P17600 705 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 PRPH2P23942 346 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 PTPN6P29350 595 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 BMP8BP34820 402 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 FAM189BP81408 668 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 CSTF3Q12996 717 aaKnown RBP10.33□□□□□ -0.76
CAPN3-205ENST00000357568 PTPRNQ16849 979 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 BCL7AQ4VC05 210 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 USP39Q53GS9 565 aaKnown RBP10.33□□□□□ -0.76
CAPN3-205ENST00000357568 ARMCX4Q5H9R4 360 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 HABP4Q5JVS0 413 aaKnown RBP10.33□□□□□ -0.76
CAPN3-205ENST00000357568 CBLL1Q75N03 491 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 MILR1Q7Z6M3 343 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 DEFB128Q7Z7B8 93 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 BPHLQ86WA6 291 aaPredicted RBP10.33□□□□□ -0.76
CAPN3-205ENST00000357568 STK40Q8N2I9 435 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 PNPLA1Q8N8W4 532 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 SPERTQ8NA61 448 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 SLC7A6Q92536 515 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 CEP19Q96LK0 163 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 BARD1Q99728 777 aaKnown RBP10.33□□□□□ -0.76
CAPN3-205ENST00000357568 DHRS9Q9BPW9 319 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 RHNO1Q9BSD3 238 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 MTIF3Q9H2K0 278 aaKnown RBP10.33□□□□□ -0.76
CAPN3-205ENST00000357568 LRTM1Q9HBL6 345 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 CNOT2Q9NZN8 540 aaKnown RBP10.33□□□□□ -0.76
CAPN3-205ENST00000357568 EVLQ9UI08 416 aaPredicted RBP10.33□□□□□ -0.76
CAPN3-205ENST00000357568 KLHL21Q9UJP4 597 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 AGO1Q9UL18 857 aaKnown RBP10.33□□□□□ -0.76
CAPN3-205ENST00000357568 SAMHD1Q9Y3Z3 626 aaKnown RBP10.33□□□□□ -0.76
CAPN3-205ENST00000357568 ZNF623O75123 536 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 HLA-DMAP28067 261 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 CA5AP35218 305 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 GTF2H3Q13889 308 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 NFE2Q16621 373 aaPredicted RBP10.33□□□□□ -0.76
CAPN3-205ENST00000357568 TMEM240Q5SV17 173 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 FAM171A1Q5VUB5 890 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 IL31Q6EBC2 164 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 MRPL10Q7Z7H8 261 aaKnown RBP10.33□□□□□ -0.76
CAPN3-205ENST00000357568 LIX1Q8N485 282 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 ATG16L2Q8NAA4 619 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 GGHQ92820 318 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 USP7Q93009 1102 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 SPATA17Q96L03 361 aa10.33□□□□□ -0.76
CAPN3-205ENST00000357568 TRNT1Q96Q11 434 aaKnown RBP10.33□□□□□ -0.76
CAPN3-205ENST00000357568 SEMA3CQ99985 751 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms