RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 PI15O43692 258 aa16.83■□□□□ 0.29
COL27A1-201ENST00000356083 SGCZQ96LD1 299 aa16.83■□□□□ 0.29
COL27A1-201ENST00000356083 EPYCQ99645 322 aa16.83■□□□□ 0.29
COL27A1-201ENST00000356083 CA14Q9ULX7 337 aa16.83■□□□□ 0.29
COL27A1-201ENST00000356083 PCDHGB1Q9Y5G3 927 aa16.83■□□□□ 0.29
COL27A1-201ENST00000356083 TCAF2A6NFQ2 919 aa16.83■□□□□ 0.29
COL27A1-201ENST00000356083 FAM92BQ6ZTR7 304 aa16.83■□□□□ 0.29
COL27A1-201ENST00000356083 AVL9Q8NBF6 648 aa16.83■□□□□ 0.29
COL27A1-201ENST00000356083 PPTC7Q8NI37 304 aa16.83■□□□□ 0.29
COL27A1-201ENST00000356083 DGCR14Q96DF8 476 aaKnown RBP16.83■□□□□ 0.29
COL27A1-201ENST00000356083 EIF5A2Q9GZV4 153 aaKnown RBP16.83■□□□□ 0.29
COL27A1-201ENST00000356083 UTS2RQ9UKP6 389 aa16.83■□□□□ 0.29
COL27A1-201ENST00000356083 CLN5O75503 358 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 ECT2LQ008S8 904 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 CLCQ05315 142 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 VMACQ2NL98 169 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 POC1BQ8TC44 478 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 RHOJQ9H4E5 214 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 TMPRSS11EQ9UL52 423 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 PCDH7O60245 1069 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 SH3D19Q5HYK7 790 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 RAET1LQ5VY80 246 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 PDE12Q6L8Q7 609 aaKnown RBP16.83■□□□□ 0.28
COL27A1-201ENST00000356083 C1orf21Q9H246 121 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 HOXB2P14652 356 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 GLP1RP43220 463 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 KLHL22Q53GT1 634 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 EGFLAMQ63HQ2 1017 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 KANK2Q63ZY3 851 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 DLK2Q6UY11 383 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 BBS12Q6ZW61 710 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 CYP2U1Q7Z449 544 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 PHB2Q99623 299 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 H0YJX3 145 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 ADAMTS3O15072 1205 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 ADRB2P07550 413 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 PTGS2P35354 604 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 EPS8L1Q8TE68 723 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 CAPNS2Q96L46 248 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 PCDHB18PQ96TA0 734 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 PTGES2Q9H7Z7 377 aa16.83■□□□□ 0.28
COL27A1-201ENST00000356083 LRRC7Q96NW7 1537 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 OR6C6A6NF89 314 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 OR6C70A6NIJ9 312 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 ETV5P41161 510 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 MLLT10P55197 1068 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 OR2B6P58173 313 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 MAP4K3Q8IVH8 894 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 PCDHGB2Q9Y5G2 931 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 A0A1B0GVI7 797 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 ELF3P78545 371 aaPredicted RBP16.82■□□□□ 0.28
COL27A1-201ENST00000356083 TEX44Q53QW1 395 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 VSTM1Q6UX27 236 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 SLC22A18Q96BI1 424 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 EHD4Q9H223 541 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 ZCCHC3Q9NUD5 404 aaKnown RBP16.82■□□□□ 0.28
COL27A1-201ENST00000356083 SPARCP09486 303 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 FRS2Q8WU20 508 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 SLC6A7Q99884 636 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 SMURF2Q9HAU4 748 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 PRMT8Q9NR22 394 aaPredicted RBP16.82■□□□□ 0.28
COL27A1-201ENST00000356083 SLC17A7Q9P2U7 560 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 A0A0U1RQJ8 604 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 BCHEP06276 602 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 CAPSQ13938 189 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 ACMSDQ8TDX5 336 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 HERC2P3Q9BVR0 1158 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 NUFIP1Q9UHK0 495 aaKnown RBP16.82■□□□□ 0.28
COL27A1-201ENST00000356083 NMBRP28336 390 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 CSKP41240 450 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 GABRB2P47870 512 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 DECR1Q16698 335 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 ESCO2Q56NI9 601 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 DCDC5Q6ZRR9 648 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 C19orf25Q9UFG5 118 aaPredicted RBP16.82■□□□□ 0.28
COL27A1-201ENST00000356083 SLC7A11Q9UPY5 501 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 ALKQ9UM73 1620 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 H3BQF6 201 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 FARS2O95363 451 aaKnown RBP16.82■□□□□ 0.28
COL27A1-201ENST00000356083 C2P06681 752 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 MARCKSL1P49006 195 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 CRISP1P54107 249 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 UGT8Q16880 541 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 GKN2Q86XP6 184 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 FAM156AQ8NDB6 213 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 TMEM165Q9HC07 324 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 ZNF180Q9UJW8 692 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 PCTPQ9UKL6 214 aa16.82■□□□□ 0.28
COL27A1-201ENST00000356083 SCN3AQ9NY46 2000 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 ADH5P11766 374 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 FPGSQ05932 587 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 OR8D2Q9GZM6 311 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 RMI1Q9H9A7 625 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 MAN2C1Q9NTJ4 1040 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 A0A1B0GVM2 712 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 MPZL2O60487 215 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 COL6A2P12110 1019 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 VIPR1P32241 457 aa16.81■□□□□ 0.28
COL27A1-201ENST00000356083 EIF5AP63241 154 aaKnown RBP16.81■□□□□ 0.28
COL27A1-201ENST00000356083 SLBPQ14493 270 aaKnown RBP eCLIP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms