RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 PKP3Q9Y446 797 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 PCSK5Q92824 1860 aa5.43□□□□□ -1.54
CD47-201ENST00000355354 CFAP73A6NFT4 308 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 PRRG1O14668 218 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 TGDSO95455 350 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 CKMT1AP12532 417 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 RDXP35241 583 aaKnown RBP5.42□□□□□ -1.54
CD47-201ENST00000355354 PPM1AP35813 382 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 ADH7P40394 386 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 FXYD6P3P58550 94 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 GSTM4Q03013 218 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 PTPRNQ16849 979 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 Q6ZNX1 250 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 P2RY8Q86VZ1 359 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 TMEM25Q86YD3 366 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 C12orf76Q8N812 135 aaPredicted RBP5.42□□□□□ -1.54
CD47-201ENST00000355354 OR4F6Q8NGB9 312 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 OR11H4Q8NGC9 324 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 IFT74Q96LB3 600 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 TSNARE1Q96NA8 513 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 RAD18Q9NS91 495 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 ANKRD10Q9NXR5 420 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.42□□□□□ -1.54
CD47-201ENST00000355354 SPG21Q9NZD8 308 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 RALYQ9UKM9 306 aaKnown RBP5.42□□□□□ -1.54
CD47-201ENST00000355354 BLOC1S6Q9UL45 172 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 PSMD13Q9UNM6 376 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 NACAE9PAV3 2078 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 PCDH17O14917 1159 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 LZTS3O60299 673 aaPredicted RBP5.42□□□□□ -1.54
CD47-201ENST00000355354 ZWINTO95229 277 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 SOX14O95416 240 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 SOD1P00441 154 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 CSF2P04141 144 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 SERPINE1P05121 402 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 CTSLP07711 333 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 CRHBPP24387 322 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 NFKBIAP25963 317 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 TGFBR2P37173 567 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 LBRQ14739 615 aaKnown RBP5.42□□□□□ -1.54
CD47-201ENST00000355354 SMUG1Q53HV7 270 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 CRB2Q5IJ48 1285 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 FAM151BQ6UXP7 276 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 RGL4Q8IZJ4 473 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 GLB1L3Q8NCI6 653 aaPredicted RBP5.42□□□□□ -1.54
CD47-201ENST00000355354 PATE1Q8WXA2 126 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 TMBIM1Q969X1 311 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 CIDECQ96AQ7 238 aaPredicted RBP5.42□□□□□ -1.54
CD47-201ENST00000355354 LRRC58Q96CX6 371 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 LMF1Q96S06 567 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 HNRNPABQ99729 332 aaKnown RBP5.42□□□□□ -1.54
CD47-201ENST00000355354 WDCPQ9H6R7 721 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 GLOD4Q9HC38 313 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 ELF5Q9UKW6 265 aaPredicted RBP5.42□□□□□ -1.54
CD47-201ENST00000355354 TRIM64CA6NLI5 447 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 PGLSO95336 258 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 CFDP00746 253 aaPredicted RBP5.42□□□□□ -1.54
CD47-201ENST00000355354 RCAN2Q14206 197 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 PRPSAP1Q14558 356 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 SSX1Q16384 188 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 KYAT3Q6YP21 454 aaKnown RBP5.42□□□□□ -1.54
CD47-201ENST00000355354 PLEKHG7Q6ZR37 379 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 ARCQ7LC44 396 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 ZAR1Q86SH2 424 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 NPAS3Q8IXF0 933 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 IQCF1Q8N6M8 205 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 TMEM203Q969S6 136 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 IMP4Q96G21 291 aaKnown RBP5.42□□□□□ -1.54
CD47-201ENST00000355354 RUNDC3BQ96NL0 473 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 MID1IP1Q9NPA3 183 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 IFT80Q9P2H3 777 aaPredicted RBP5.42□□□□□ -1.54
CD47-201ENST00000355354 PLAGL1Q9UM63 463 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 GIT1Q9Y2X7 761 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 DTNAQ9Y4J8 743 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 MASP2O00187 686 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 NUAK1O60285 661 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 DOK2O60496 412 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 GUCY1B2O75343 617 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 GPIP06744 558 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 CLUP10909 449 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 HPCAL1P37235 193 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 GPLD1P80108 840 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 KCNJ8Q15842 424 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 TTC39BQ5VTQ0 682 aaPredicted RBP5.42□□□□□ -1.54
CD47-201ENST00000355354 GARNL3Q5VVW2 1013 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 TIFABQ6ZNK6 161 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 TPGS1Q6ZTW0 290 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 Q6ZVL8 140 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 VN1R5Q7Z5H4 357 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 C11orf74Q86VG3 221 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 GIPC3Q8TF64 312 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 GBA3Q9H227 469 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 PRMT7Q9NVM4 692 aaPredicted RBP5.42□□□□□ -1.54
CD47-201ENST00000355354 NDE1Q9NXR1 346 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 PCTPQ9UKL6 214 aa5.42□□□□□ -1.54
CD47-201ENST00000355354 ZBBXA8MT70 800 aa5.41□□□□□ -1.54
CD47-201ENST00000355354 IDSB3KWA1 339 aa5.41□□□□□ -1.54
CD47-201ENST00000355354 LRP3O75074 770 aa5.41□□□□□ -1.54
CD47-201ENST00000355354 SOX30O94993 753 aa5.41□□□□□ -1.54
CD47-201ENST00000355354 OAZ2O95190 189 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms