RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 WFIKKN2Q8TEU8 576 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 GAB3Q8WWW8 586 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 SPATA9Q9BWV2 254 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 IL1RAPQ9NPH3 570 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 PCDHGA8Q9Y5G5 932 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 SLC16A6O15403 523 aa21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 NOL3O60936 208 aaKnown RBP21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 HNRNPA1P09651 372 aaKnown RBP eCLIP21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 FPGSQ05932 587 aa21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 SPIDRQ14159 915 aa21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 GPR107Q5VW38 600 aa21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 TMEM220Q6QAJ8 160 aa21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 DCP2Q8IU60 420 aaKnown RBP21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 HS3ST5Q8IZT8 346 aa21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 FBXO15Q8NCQ5 510 aaPredicted RBP21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 BADQ92934 168 aa21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 MAGED4Q96JG8 741 aa21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 FAM8A1Q9UBU6 413 aa21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 KCNE2Q9Y6J6 123 aa21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 KCNK5O95279 499 aa21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 CCR3P51677 355 aa21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 ST8SIA6P61647 398 aa21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 HPCAP84074 193 aa21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 LRRC74AQ0VAA2 488 aa21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 NEDD8Q15843 81 aa21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 ZNF551Q7Z340 670 aaPredicted RBP21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 TMEM179BQ7Z7N9 219 aa21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 NLRP8Q86W28 1048 aa21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 RNF175Q8N4F7 328 aa21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 OR13F1Q8NGS4 319 aa21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 POF1BQ8WVV4 589 aa21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 PHF12Q96QT6 1004 aa21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 PKP4Q99569 1192 aa21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 CORO2BQ9UQ03 480 aa21.53■■□□□ 1.04
NKX2-1-201ENST00000354822 B3GALT4O96024 378 aa21.52■■□□□ 1.04
NKX2-1-201ENST00000354822 PPIBP23284 216 aaKnown RBP21.52■■□□□ 1.04
NKX2-1-201ENST00000354822 IMPA1P29218 277 aa21.52■■□□□ 1.04
NKX2-1-201ENST00000354822 RYKP34925 604 aa21.52■■□□□ 1.04
NKX2-1-201ENST00000354822 PREPP48147 710 aa21.52■■□□□ 1.04
NKX2-1-201ENST00000354822 CTBSQ01459 385 aa21.52■■□□□ 1.04
NKX2-1-201ENST00000354822 DDX39BQ13838 428 aaKnown RBP21.52■■□□□ 1.04
NKX2-1-201ENST00000354822 E2F2Q14209 437 aa21.52■■□□□ 1.04
NKX2-1-201ENST00000354822 SPIN4Q56A73 249 aa21.52■■□□□ 1.04
NKX2-1-201ENST00000354822 PRSS36Q5K4E3 855 aa21.52■■□□□ 1.04
NKX2-1-201ENST00000354822 TMEM240Q5SV17 173 aa21.52■■□□□ 1.04
NKX2-1-201ENST00000354822 C10orf62Q5T681 223 aaPredicted RBP21.52■■□□□ 1.04
NKX2-1-201ENST00000354822 ANXA8L1Q5VT79 327 aa21.52■■□□□ 1.04
NKX2-1-201ENST00000354822 TMEM26Q6ZUK4 368 aa21.52■■□□□ 1.04
NKX2-1-201ENST00000354822 R3HCC1LQ7Z5L2 792 aaKnown RBP21.52■■□□□ 1.04
NKX2-1-201ENST00000354822 SPPL3Q8TCT6 385 aa21.52■■□□□ 1.04
NKX2-1-201ENST00000354822 REPS1Q96D71 796 aa21.52■■□□□ 1.04
NKX2-1-201ENST00000354822 OR4K3Q96R72 315 aa21.52■■□□□ 1.04
NKX2-1-201ENST00000354822 DUSP26Q9BV47 211 aa21.52■■□□□ 1.04
NKX2-1-201ENST00000354822 GABARAPL1Q9H0R8 117 aa21.52■■□□□ 1.04
NKX2-1-201ENST00000354822 TM9SF3Q9HD45 589 aa21.52■■□□□ 1.04
NKX2-1-201ENST00000354822 BTNL2Q9UIR0 455 aa21.52■■□□□ 1.04
NKX2-1-201ENST00000354822 PCDHB11Q9Y5F2 797 aa21.52■■□□□ 1.04
NKX2-1-201ENST00000354822 GMEB1Q9Y692 573 aa21.52■■□□□ 1.04
NKX2-1-201ENST00000354822 AP1M2Q9Y6Q5 423 aa21.52■■□□□ 1.04
NKX2-1-201ENST00000354822 TRIM64BA6NI03 449 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 H3BMQ9 156 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 ZNF197O14709 1029 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 ZNF682O95780 498 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 SLC16A8O95907 504 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 GSTM2P28161 218 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 KDELR2P33947 212 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 DGKGP49619 791 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 TMBIM6P55061 237 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 SLC14A1Q13336 389 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 VEZF1Q14119 521 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 OR2T5Q6IEZ7 315 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 CHST15Q7LFX5 561 aaPredicted RBP21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 CAMKMTQ7Z624 323 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 ZZZ3Q8IYH5 903 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 CHDHQ8NE62 594 aaPredicted RBP21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 OR2T29Q8NH02 315 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 COG8Q96MW5 612 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 TMEM106CQ9BVX2 250 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 BAG5Q9UL15 447 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 NPC1O15118 1278 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 SCAMP2O15127 329 aaKnown RBP21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 CPSF4O95639 269 aaKnown RBP21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 CISD3P0C7P0 127 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 WEE1P30291 646 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 PIGAP37287 484 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 DHCR24Q15392 516 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 LRRC23Q53EV4 343 aaPredicted RBP21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 CPTPQ5TA50 214 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 ZNF691Q5VV52 312 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 OR7G3Q8NG95 312 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 CHTF18Q8WVB6 975 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 ZSWIM3Q96MP5 696 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 ZCCHC2Q9C0B9 1178 aaKnown RBP21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 PRKAG2Q9UGJ0 569 aa21.51■■□□□ 1.03
NKX2-1-201ENST00000354822 H3BM21 787 aa21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 B4GAT1O43505 415 aa21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 TLL1O43897 1013 aa21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 SEC14L2O76054 403 aa21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 ITGAMP11215 1152 aa21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 PRKACGP22612 351 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms