RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 CRISPLD2Q9H0B8 497 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 TBC1D14Q9P2M4 693 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 RPS6KA6Q9UK32 745 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 ERVK-11Q9UQG0 969 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 SLC1A7O00341 560 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 CATP04040 527 aaKnown RBP21.41■■□□□ 1.02
UPF3A-201ENST00000351487 CTSLP07711 333 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 CCNA2P20248 432 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 ACSM2AQ08AH3 577 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 ACSM2BQ68CK6 577 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 PTOV1Q86YD1 416 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 RASGEF1AQ8N9B8 481 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 LZICQ8WZA0 190 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 OR4K3Q96R72 315 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 MTERF1Q99551 399 aaKnown RBP21.41■■□□□ 1.02
UPF3A-201ENST00000351487 LINC00597Q9H2U6 94 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 GPN2Q9H9Y4 310 aaPredicted RBP21.41■■□□□ 1.02
UPF3A-201ENST00000351487 DKK3Q9UBP4 350 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 FAF1Q9UNN5 650 aaPredicted RBP21.41■■□□□ 1.02
UPF3A-201ENST00000351487 ABCG2Q9UNQ0 655 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 GMEB1Q9Y692 573 aa21.41■■□□□ 1.02
UPF3A-201ENST00000351487 SLC5A10A0PJK1 596 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 TTC34A8MYJ7 566 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 ATG13O75143 517 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 C1QCP02747 245 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 CCDC159P0C7I6 412 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 IGFBP5P24593 272 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 MAPK9P45984 424 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 CTSCP53634 463 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 NAE1Q13564 534 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 E2F2Q14209 437 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 ZNF77Q15935 545 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 KLHL23Q8NBE8 558 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 DRAXINQ8NBI3 349 aaPredicted RBP21.4■■□□□ 1.02
UPF3A-201ENST00000351487 PIK3C3Q8NEB9 887 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 OR56A3Q8NH54 315 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 TBC1D15Q8TC07 691 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 GLYATL1Q969I3 302 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 PREBQ9HCU5 417 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 MARK1Q9P0L2 795 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 NOTCH4Q99466 2003 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 BCKDKO14874 412 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 SCAMP2O15127 329 aaKnown RBP21.4■■□□□ 1.02
UPF3A-201ENST00000351487 DNAJB5O75953 348 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 CD247P20963 164 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 AGXTP21549 392 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 KDELR2P33947 212 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 VEGFBP49765 207 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 GALK1P51570 392 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 ZNF805Q5CZA5 627 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 CAMKMTQ7Z624 323 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 CYP4Z1Q86W10 505 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 SPATA9Q9BWV2 254 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 TRIT1Q9H3H1 467 aaKnown RBP21.4■■□□□ 1.02
UPF3A-201ENST00000351487 IL36AQ9UHA7 158 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 MAPRE3Q9UPY8 281 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 IRAK3Q9Y616 596 aa21.4■■□□□ 1.02
UPF3A-201ENST00000351487 PRRC2BQ5JSZ5 2229 aaKnown RBP21.39■■□□□ 1.02
UPF3A-201ENST00000351487 MYO1DO94832 1006 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 IMPA1P29218 277 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 NNMTP40261 264 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 ASMTP46597 345 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 PLA2G16P53816 162 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 VEZF1Q14119 521 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 ARHGAP15Q53QZ3 475 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 KLHL35Q6PF15 583 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 ZNF621Q6ZSS3 439 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 CBLL1Q75N03 491 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 CLECL1Q8IZS7 167 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 HCAR2Q8TDS4 363 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 CYB5D2Q8WUJ1 264 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 LRIG1Q96JA1 1093 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 SAGE1Q9NXZ1 904 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 FAM8A1Q9UBU6 413 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 PCDHB11Q9Y5F2 797 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 NPC1O15118 1278 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 YY2O15391 372 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 LAMP1P11279 417 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 MMP12P39900 470 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 DDX39BQ13838 428 aaKnown RBP21.39■■□□□ 1.01
UPF3A-201ENST00000351487 KDM4DQ6B0I6 523 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 ANKRD26P1Q6NSI1 321 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 CEP68Q76N32 757 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 EIF3MQ7L2H7 374 aaKnown RBP21.39■■□□□ 1.01
UPF3A-201ENST00000351487 SETD9Q8NE22 299 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 FNDC8Q8TC99 324 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 SORCS1Q8WY21 1168 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 MUL1Q969V5 352 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 MED8Q96G25 268 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 CCM2Q9BSQ5 444 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 SGK2Q9HBY8 427 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 BTNL2Q9UIR0 455 aa21.39■■□□□ 1.01
UPF3A-201ENST00000351487 PCM1Q15154 2024 aa21.38■■□□□ 1.01
UPF3A-201ENST00000351487 M0QX08 132 aa21.38■■□□□ 1.01
UPF3A-201ENST00000351487 UGT2B11O75310 529 aa21.38■■□□□ 1.01
UPF3A-201ENST00000351487 TIMP1P01033 207 aa21.38■■□□□ 1.01
UPF3A-201ENST00000351487 FABP3P05413 133 aa21.38■■□□□ 1.01
UPF3A-201ENST00000351487 INHBBP09529 407 aa21.38■■□□□ 1.01
UPF3A-201ENST00000351487 ITIH1P19827 911 aa21.38■■□□□ 1.01
UPF3A-201ENST00000351487 FPR1P21462 350 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms