RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 TANGO2Q6ICL3 276 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 OGFOD2Q6N063 350 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 TRIM48Q8IWZ4 208 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 MIPOL1Q8TD10 442 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 NETO1Q8TDF5 533 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 GAB3Q8WWW8 586 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 RHBDF1Q96CC6 855 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 THAP11Q96EK4 314 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 CHFRQ96EP1 664 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 RHNO1Q9BSD3 238 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 BDH2Q9BUT1 245 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 PAIP1Q9H074 479 aaKnown RBP10.08□□□□□ -0.8
SMPD4-201ENST00000351288 C5AR2Q9P296 337 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 A0A087WXM4 84 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 E7EQ34 232 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 FPGTO14772 594 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 AREL1O15033 823 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 MID1O15344 667 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 CAPNS1P04632 268 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 ANXA6P08133 673 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 BCKDHAP12694 445 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 C6P13671 934 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 TIMP2P16035 220 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 ARSFP54793 590 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 HPCAP84074 193 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 C2orf80Q0P641 193 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 CNTN1Q12860 1018 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 CATSPEREQ5SY80 951 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 CAPN13Q6MZZ7 669 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-201ENST00000351288 ABRAXAS1Q6UWZ7 409 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 ZNF783Q6ZMS7 281 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 GTF2H4Q92759 462 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 NRTNQ99748 197 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 NPLQ9BXD5 320 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-201ENST00000351288 BRINP2Q9C0B6 783 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 TAC3Q9UHF0 121 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 CNOT11Q9UKZ1 510 aaKnown RBP10.08□□□□□ -0.8
SMPD4-201ENST00000351288 DOLKQ9UPQ8 538 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 PCDHB14Q9Y5E9 798 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 ARHGEF15O94989 841 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 SERPINA1P01009 418 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 GPIP06744 558 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 POU2F1P14859 743 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 MATN1P21941 496 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 MAPK1P28482 360 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 RPS13P62277 151 aaKnown RBP10.07□□□□□ -0.8
SMPD4-201ENST00000351288 CYP4F3Q08477 520 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 ZNF234Q14588 700 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 PDGFRLQ15198 375 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 TMEM215Q68D42 235 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 MSRB3Q8IXL7 192 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 CPA6Q8N4T0 437 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 UTP15Q8TED0 518 aaKnown RBP10.07□□□□□ -0.8
SMPD4-201ENST00000351288 EXOSC8Q96B26 276 aaKnown RBP10.07□□□□□ -0.8
SMPD4-201ENST00000351288 C12orf66Q96MD2 445 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 FBXL12Q9NXK8 326 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 PLXNA3P51805 1871 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 MAGEB17A8MXT2 336 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 G3V2T6 193 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 ENO2P09104 434 aaPredicted RBP10.07□□□□□ -0.8
SMPD4-201ENST00000351288 PFKLP17858 780 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 MYF6P23409 242 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 DGCR6Q14129 220 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 DOC2AQ14183 400 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 TBC1D21Q8IYX1 336 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 CLECL1Q8IZS7 167 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 ZNF614Q8N883 585 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 CNIH3Q8TBE1 160 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 FATE1Q969F0 183 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 UBE2FQ969M7 185 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 ACPTQ9BZG2 426 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 REXO4Q9GZR2 422 aaKnown RBP10.07□□□□□ -0.8
SMPD4-201ENST00000351288 RASSF1Q9NS23 344 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 WBP1LQ9NX94 342 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 ATXN10Q9UBB4 475 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 CA5BQ9Y2D0 317 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 ZNF451Q9Y4E5 1061 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 PCDHGA11Q9Y5H2 935 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 PLXNA4Q9HCM2 1894 aa10.07□□□□□ -0.8
SMPD4-201ENST00000351288 ELOVL7A1L3X0 281 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 H7BY64 318 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 KAT7O95251 611 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 DNTTP04053 509 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 APODP05090 189 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 ZNF8P17098 575 aaPredicted RBP10.06□□□□□ -0.8
SMPD4-201ENST00000351288 ALDH3B2P48448 385 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 NKX3-2P78367 333 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 SHHQ15465 462 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 PDCD4Q53EL6 469 aaKnown RBP10.06□□□□□ -0.8
SMPD4-201ENST00000351288 INTS11Q5TA45 600 aaKnown RBP10.06□□□□□ -0.8
SMPD4-201ENST00000351288 LIPIQ6XZB0 460 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 R3HCC1LQ7Z5L2 792 aaKnown RBP10.06□□□□□ -0.8
SMPD4-201ENST00000351288 VTCN1Q7Z7D3 282 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 AMZ2Q86W34 360 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 FAM129CQ86XR2 697 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 TMC8Q8IU68 726 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 RASGEF1AQ8N9B8 481 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 ZNF555Q8NEP9 628 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 TFGQ92734 400 aaPredicted RBP10.06□□□□□ -0.8
SMPD4-201ENST00000351288 SLC47A1Q96FL8 570 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms