RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 PCDHGA6Q9Y5G7 932 aa18.11■□□□□ 0.49
SCARF1-202ENST00000348987 CDK2AP1O14519 115 aa18.1■□□□□ 0.49
SCARF1-202ENST00000348987 KLK8O60259 260 aa18.1■□□□□ 0.49
SCARF1-202ENST00000348987 SLITRK5O94991 958 aa18.1■□□□□ 0.49
SCARF1-202ENST00000348987 HOXB8P17481 243 aaPredicted RBP18.1■□□□□ 0.49
SCARF1-202ENST00000348987 DNAJA1P31689 397 aaKnown RBP18.1■□□□□ 0.49
SCARF1-202ENST00000348987 PBX3P40426 434 aa18.1■□□□□ 0.49
SCARF1-202ENST00000348987 MFSD14CQ5VZR4 134 aa18.1■□□□□ 0.49
SCARF1-202ENST00000348987 OR7D4Q8NG98 312 aa18.1■□□□□ 0.49
SCARF1-202ENST00000348987 BRSK1Q8TDC3 778 aa18.1■□□□□ 0.49
SCARF1-202ENST00000348987 GGHQ92820 318 aa18.1■□□□□ 0.49
SCARF1-202ENST00000348987 FATE1Q969F0 183 aa18.1■□□□□ 0.49
SCARF1-202ENST00000348987 UROC1Q96N76 676 aa18.1■□□□□ 0.49
SCARF1-202ENST00000348987 ZNF382Q96SR6 550 aa18.1■□□□□ 0.49
SCARF1-202ENST00000348987 FBXO44Q9H4M3 255 aa18.1■□□□□ 0.49
SCARF1-202ENST00000348987 UBA2Q9UBT2 640 aaPredicted RBP18.1■□□□□ 0.49
SCARF1-202ENST00000348987 ZMYM5Q9UJ78 669 aa18.1■□□□□ 0.49
SCARF1-202ENST00000348987 SAMHD1Q9Y3Z3 626 aaKnown RBP18.1■□□□□ 0.49
SCARF1-202ENST00000348987 PTHP01270 115 aa18.1■□□□□ 0.49
SCARF1-202ENST00000348987 LIMK1P53667 647 aa18.1■□□□□ 0.49
SCARF1-202ENST00000348987 DAB2P98082 770 aa18.1■□□□□ 0.49
SCARF1-202ENST00000348987 MILR1Q7Z6M3 343 aa18.1■□□□□ 0.49
SCARF1-202ENST00000348987 CLHC1Q8NHS4 586 aa18.1■□□□□ 0.49
SCARF1-202ENST00000348987 VPS35Q96QK1 796 aa18.1■□□□□ 0.49
SCARF1-202ENST00000348987 OR52E6Q96RD3 313 aa18.1■□□□□ 0.49
SCARF1-202ENST00000348987 TTPALQ9BTX7 342 aa18.1■□□□□ 0.49
SCARF1-202ENST00000348987 GPR83Q9NYM4 423 aa18.1■□□□□ 0.49
SCARF1-202ENST00000348987 PRAMEF11O60813 436 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 STSP08842 583 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 ADORA3P0DMS8 318 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 PRKAR2AP13861 404 aaKnown RBP18.09■□□□□ 0.49
SCARF1-202ENST00000348987 PKLRP30613 574 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 FCHO2Q0JRZ9 810 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 CAMK2GQ13555 558 aaPredicted RBP18.09■□□□□ 0.49
SCARF1-202ENST00000348987 FAAH2Q6GMR7 532 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 OR4F6Q8NGB9 312 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 OR4K2Q8NGD2 314 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 SETD6Q8TBK2 473 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 C8orf48Q96LL4 319 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 NECTIN4Q96NY8 510 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 DPY30Q9C005 99 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 IL1RAPQ9NPH3 570 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 HCSTQ9UBK5 93 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 KCNN3Q9UGI6 736 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 OR6C70A6NIJ9 312 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 DRGXA6NNA5 263 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 FAM220BPB1ANY3 271 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 GPR39O43194 453 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 SEPT4O43236 478 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 ZNF780AO75290 641 aaPredicted RBP18.09■□□□□ 0.49
SCARF1-202ENST00000348987 FGF1P05230 155 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 CDK1P06493 297 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 SLC10A3P09131 477 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 IFI30P13284 250 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 FPR1P21462 350 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 PIK3CGP48736 1102 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 GZMMP51124 257 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 VLDLRP98155 873 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 ARHGEF6Q15052 776 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 TRIM60Q495X7 471 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 GPSM1Q86YR5 675 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 GLB1L3Q8NCI6 653 aaPredicted RBP18.09■□□□□ 0.49
SCARF1-202ENST00000348987 GPR150Q8NGU9 434 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 MYDGFQ969H8 173 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 MCCC1Q96RQ3 725 aaPredicted RBP18.09■□□□□ 0.49
SCARF1-202ENST00000348987 GON7Q9BXV9 100 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 TSR3Q9UJK0 312 aaKnown RBP18.09■□□□□ 0.49
SCARF1-202ENST00000348987 ITM2BQ9Y287 266 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 PCDHB5Q9Y5E4 795 aa18.09■□□□□ 0.49
SCARF1-202ENST00000348987 OR1I1O60431 355 aa18.08■□□□□ 0.49
SCARF1-202ENST00000348987 IL1RNP18510 177 aa18.08■□□□□ 0.49
SCARF1-202ENST00000348987 HLA-DPA1P20036 260 aa18.08■□□□□ 0.49
SCARF1-202ENST00000348987 TIE1P35590 1138 aa18.08■□□□□ 0.49
SCARF1-202ENST00000348987 DSC1Q08554 894 aa18.08■□□□□ 0.49
SCARF1-202ENST00000348987 SYCE2Q6PIF2 218 aa18.08■□□□□ 0.49
SCARF1-202ENST00000348987 GLB1LQ6UWU2 654 aa18.08■□□□□ 0.49
SCARF1-202ENST00000348987 VTCN1Q7Z7D3 282 aa18.08■□□□□ 0.49
SCARF1-202ENST00000348987 CALHM3Q86XJ0 350 aa18.08■□□□□ 0.49
SCARF1-202ENST00000348987 GRAMD2AQ8IUY3 354 aa18.08■□□□□ 0.49
SCARF1-202ENST00000348987 TRIM48Q8IWZ4 208 aa18.08■□□□□ 0.49
SCARF1-202ENST00000348987 PIANPQ8IYJ0 282 aa18.08■□□□□ 0.49
SCARF1-202ENST00000348987 PAF1Q8N7H5 531 aa18.08■□□□□ 0.49
SCARF1-202ENST00000348987 ST13P5Q8NFI4 369 aaPredicted RBP18.08■□□□□ 0.49
SCARF1-202ENST00000348987 EEF1AKMT1Q8WVE0 214 aa18.08■□□□□ 0.49
SCARF1-202ENST00000348987 RMDN1Q96DB5 314 aa18.08■□□□□ 0.49
SCARF1-202ENST00000348987 KCNC2Q96PR1 638 aa18.08■□□□□ 0.49
SCARF1-202ENST00000348987 TRIB3Q96RU7 358 aa18.08■□□□□ 0.49
SCARF1-202ENST00000348987 PDFQ9HBH1 243 aa18.08■□□□□ 0.49
SCARF1-202ENST00000348987 ABT1Q9ULW3 272 aaKnown RBP18.08■□□□□ 0.49
SCARF1-202ENST00000348987 TRAPPC4Q9Y296 219 aa18.08■□□□□ 0.49
SCARF1-202ENST00000348987 CLCA1A8K7I4 914 aa18.08■□□□□ 0.48
SCARF1-202ENST00000348987 POLR1CO15160 346 aaPredicted RBP18.08■□□□□ 0.48
SCARF1-202ENST00000348987 B3GALT4O96024 378 aa18.08■□□□□ 0.48
SCARF1-202ENST00000348987 CBLP22681 906 aa18.08■□□□□ 0.48
SCARF1-202ENST00000348987 ATG9BQ674R7 924 aa18.08■□□□□ 0.48
SCARF1-202ENST00000348987 RSPO2Q6UXX9 243 aaPredicted RBP18.08■□□□□ 0.48
SCARF1-202ENST00000348987 GLRX5Q86SX6 157 aa18.08■□□□□ 0.48
SCARF1-202ENST00000348987 LIX1Q8N485 282 aa18.08■□□□□ 0.48
SCARF1-202ENST00000348987 SIDT2Q8NBJ9 832 aaKnown RBP18.08■□□□□ 0.48
SCARF1-202ENST00000348987 FLCNQ8NFG4 579 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms