RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ASXL3Q9C0F0 2248 aa26.02■■□□□ 1.76
SSBP4-202ENST00000348495 HEATR5BQ9P2D3 2071 aa26.02■■□□□ 1.76
SSBP4-202ENST00000348495 HGSO14964 777 aaPredicted RBP26.02■■□□□ 1.76
SSBP4-202ENST00000348495 TROVE2P10155 538 aaKnown RBP eCLIP26.02■■□□□ 1.76
SSBP4-202ENST00000348495 CD1CP29017 333 aa26.02■■□□□ 1.76
SSBP4-202ENST00000348495 DUSP3P51452 185 aaPredicted RBP26.02■■□□□ 1.76
SSBP4-202ENST00000348495 ZRSR2Q15696 482 aaKnown RBP26.02■■□□□ 1.76
SSBP4-202ENST00000348495 PAGE2BQ5JRK9 111 aa26.02■■□□□ 1.76
SSBP4-202ENST00000348495 EFL1Q7Z2Z2 1120 aaKnown RBP26.02■■□□□ 1.76
SSBP4-202ENST00000348495 AFAP1L2Q8N4X5 818 aa26.02■■□□□ 1.76
SSBP4-202ENST00000348495 Q8N9G6 341 aaPredicted RBP26.02■■□□□ 1.76
SSBP4-202ENST00000348495 THOC1Q96FV9 657 aaKnown RBP26.02■■□□□ 1.76
SSBP4-202ENST00000348495 PPM1MQ96MI6 270 aa26.02■■□□□ 1.76
SSBP4-202ENST00000348495 SIKE1Q9BRV8 207 aa26.02■■□□□ 1.76
SSBP4-202ENST00000348495 TUBB1Q9H4B7 451 aa26.02■■□□□ 1.76
SSBP4-202ENST00000348495 ZNF490Q9ULM2 529 aaPredicted RBP26.02■■□□□ 1.76
SSBP4-202ENST00000348495 ASCC3Q8N3C0 2202 aaKnown RBP26.01■■□□□ 1.75
SSBP4-202ENST00000348495 FFAR3O14843 346 aa26.01■■□□□ 1.75
SSBP4-202ENST00000348495 GPR42O15529 346 aa26.01■■□□□ 1.75
SSBP4-202ENST00000348495 FOXD2O60548 495 aaPredicted RBP26.01■■□□□ 1.75
SSBP4-202ENST00000348495 RP1P56715 2156 aa26.01■■□□□ 1.75
SSBP4-202ENST00000348495 REEP5Q00765 189 aa26.01■■□□□ 1.75
SSBP4-202ENST00000348495 SQSTM1Q13501 440 aa26.01■■□□□ 1.75
SSBP4-202ENST00000348495 LAPTM5Q13571 262 aa26.01■■□□□ 1.75
SSBP4-202ENST00000348495 RNF165Q6ZSG1 346 aa26.01■■□□□ 1.75
SSBP4-202ENST00000348495 PIGWQ7Z7B1 504 aa26.01■■□□□ 1.75
SSBP4-202ENST00000348495 HOMEZQ8IX15 550 aa26.01■■□□□ 1.75
SSBP4-202ENST00000348495 RHBDD1Q8TEB9 315 aa26.01■■□□□ 1.75
SSBP4-202ENST00000348495 TWIST2Q8WVJ9 160 aa26.01■■□□□ 1.75
SSBP4-202ENST00000348495 USP7Q93009 1102 aa26.01■■□□□ 1.75
SSBP4-202ENST00000348495 ELAC2Q9BQ52 826 aaKnown RBP26.01■■□□□ 1.75
SSBP4-202ENST00000348495 KLHL14Q9P2G3 628 aa26.01■■□□□ 1.75
SSBP4-202ENST00000348495 SNX7Q9UNH6 387 aa26.01■■□□□ 1.75
SSBP4-202ENST00000348495 HCN4Q9Y3Q4 1203 aa26.01■■□□□ 1.75
SSBP4-202ENST00000348495 A0A0J9YY10 115 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 MANBAO00462 879 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 DUX1O43812 170 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 HMOX2P30519 316 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 HTR6P50406 440 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 DAB2P98082 770 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 MEF2AQ02078 507 aaPredicted RBP26■■□□□ 1.75
SSBP4-202ENST00000348495 CFHR1Q03591 330 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 BTKQ06187 659 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 AASDHQ4L235 1098 aaPredicted RBP26■■□□□ 1.75
SSBP4-202ENST00000348495 PAQR7Q86WK9 346 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 LAS2Q8IYD9 372 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 ZNF740Q8NDX6 193 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 WDR20Q8TBZ3 569 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 CNDP2Q96KP4 475 aaKnown RBP26■■□□□ 1.75
SSBP4-202ENST00000348495 AIF1LQ9BQI0 150 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 CCDC3Q9BQI4 270 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 PLCD4Q9BRC7 762 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 PITHD1Q9GZP4 211 aaPredicted RBP26■■□□□ 1.75
SSBP4-202ENST00000348495 KLHL20Q9Y2M5 609 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 C4orf47A7E2U8 309 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 CAPN5O15484 640 aaPredicted RBP26■■□□□ 1.75
SSBP4-202ENST00000348495 NRP2O60462 931 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 SNX3O60493 162 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 MAGP20916 626 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 CSF2RBP32927 897 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 INHBCP55103 352 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 PDCD2Q16342 344 aaPredicted RBP26■■□□□ 1.75
SSBP4-202ENST00000348495 FRG2Q64ET8 278 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 IRGCQ6NXR0 463 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 MED27Q6P2C8 311 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 BAHD1Q8TBE0 780 aaPredicted RBP26■■□□□ 1.75
SSBP4-202ENST00000348495 IFI44Q8TCB0 444 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 NCSTNQ92542 709 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 AHCYL2Q96HN2 611 aaKnown RBP26■■□□□ 1.75
SSBP4-202ENST00000348495 FRG2BQ96QU4 278 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 SARGQ9BW04 601 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 ANKMY1Q9P2S6 941 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 DCTN4Q9UJW0 460 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 SNX6Q9UNH7 406 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 TSC22D4Q9Y3Q8 395 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 PCDHGA11Q9Y5H2 935 aa26■■□□□ 1.75
SSBP4-202ENST00000348495 EP300Q09472 2414 aaPredicted RBP25.99■■□□□ 1.75
SSBP4-202ENST00000348495 OR2A25A4D2G3 310 aa25.99■■□□□ 1.75
SSBP4-202ENST00000348495 CASC3O15234 703 aaKnown RBP25.99■■□□□ 1.75
SSBP4-202ENST00000348495 ZW10O43264 779 aa25.99■■□□□ 1.75
SSBP4-202ENST00000348495 LDOC1O95751 146 aaPredicted RBP25.99■■□□□ 1.75
SSBP4-202ENST00000348495 CHEK2O96017 543 aa25.99■■□□□ 1.75
SSBP4-202ENST00000348495 KRT6AP02538 564 aa25.99■■□□□ 1.75
SSBP4-202ENST00000348495 KRT6BP04259 564 aa25.99■■□□□ 1.75
SSBP4-202ENST00000348495 CKMT2P17540 419 aa25.99■■□□□ 1.75
SSBP4-202ENST00000348495 CXCR2P25025 360 aa25.99■■□□□ 1.75
SSBP4-202ENST00000348495 KRT6CP48668 564 aa25.99■■□□□ 1.75
SSBP4-202ENST00000348495 AQP5P55064 265 aa25.99■■□□□ 1.75
SSBP4-202ENST00000348495 GFERP55789 205 aa25.99■■□□□ 1.75
SSBP4-202ENST00000348495 WDR74Q6RFH5 385 aaPredicted RBP25.99■■□□□ 1.75
SSBP4-202ENST00000348495 SPATA21Q7Z572 469 aa25.99■■□□□ 1.75
SSBP4-202ENST00000348495 NAXDQ8IW45 347 aa25.99■■□□□ 1.75
SSBP4-202ENST00000348495 KRT78Q8N1N4 520 aa25.99■■□□□ 1.75
SSBP4-202ENST00000348495 OR7G3Q8NG95 312 aa25.99■■□□□ 1.75
SSBP4-202ENST00000348495 ZUFSPQ96AP4 578 aa25.99■■□□□ 1.75
SSBP4-202ENST00000348495 NUF2Q9BZD4 464 aa25.99■■□□□ 1.75
SSBP4-202ENST00000348495 SEMA6CQ9H3T2 930 aa25.99■■□□□ 1.75
SSBP4-202ENST00000348495 NT5DC2Q9H857 520 aa25.99■■□□□ 1.75
SSBP4-202ENST00000348495 FARSBQ9NSD9 589 aaKnown RBP25.99■■□□□ 1.75
SSBP4-202ENST00000348495 SH3BP5O60239 455 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms