RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 CCDC149Q6ZUS6 474 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 ADAMTSL2Q86TH1 951 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 P3H2Q8IVL5 708 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 SPNS2Q8IVW8 549 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 SYTL1Q8IYJ3 562 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 FAM83FQ8NEG4 500 aaPredicted RBP15.41■□□□□ 0.06
HMGA1-202ENST00000347617 C9orf43Q8TAL5 461 aaPredicted RBP15.41■□□□□ 0.06
HMGA1-202ENST00000347617 HERVK_113Q902F9 699 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 TTC9Q92623 222 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 HMCESQ96FZ2 354 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 ITCHQ96J02 903 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 DEPDC7Q96QD5 511 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 COPS4Q9BT78 406 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 MAGEH1Q9H213 219 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 DIABLOQ9NR28 239 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 SLC25A37Q9NYZ2 338 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 IKZF3Q9UKT9 509 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 PNMA8BQ9ULN7 279 aaPredicted RBP15.41■□□□□ 0.06
HMGA1-202ENST00000347617 CFL2Q9Y281 166 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 PCDHGB2Q9Y5G2 931 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 RAMP2O60895 175 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 CLDN11O75508 207 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 OLFM2O95897 454 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 LCKP06239 509 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 DBTP11182 482 aaKnown RBP15.41■□□□□ 0.06
HMGA1-202ENST00000347617 NCF1P14598 390 aaPredicted RBP15.41■□□□□ 0.06
HMGA1-202ENST00000347617 SLC2A4P14672 509 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 PXNP49023 591 aaPredicted RBP15.41■□□□□ 0.06
HMGA1-202ENST00000347617 TTPAP49638 278 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 ZNF140P52738 457 aaPredicted RBP15.41■□□□□ 0.06
HMGA1-202ENST00000347617 MAXP61244 160 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 C19orf57Q0VDD7 668 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 SERINC3Q13530 473 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 EIF4HQ15056 248 aaKnown RBP15.41■□□□□ 0.06
HMGA1-202ENST00000347617 FAM174BQ3ZCQ3 159 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 TMEM240Q5SV17 173 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 FAHD1Q6P587 224 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 CHST9Q7L1S5 443 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 GALNT5Q7Z7M9 940 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 CCDC190Q86UF4 302 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 Q8N9G6 341 aaPredicted RBP15.41■□□□□ 0.06
HMGA1-202ENST00000347617 GABARAPL3Q9BY60 117 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 ZBTB20Q9HC78 741 aaPredicted RBP15.41■□□□□ 0.06
HMGA1-202ENST00000347617 DDX28Q9NUL7 540 aaKnown RBP15.41■□□□□ 0.06
HMGA1-202ENST00000347617 FKBP14Q9NWM8 211 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 PSORS1C1Q9UIG5 152 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 UTS2RQ9UKP6 389 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 SATB2Q9UPW6 733 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 FAM50BQ9Y247 325 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 BTBD3Q9Y2F9 522 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 CAB39Q9Y376 341 aaPredicted RBP15.41■□□□□ 0.06
HMGA1-202ENST00000347617 RWDD3Q9Y3V2 267 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 ARL5AQ9Y689 179 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 PTPRSQ13332 1948 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 HMX3A6NHT5 357 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 DSCR3O14972 297 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 STC2O76061 302 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 PGLSO95336 258 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 TSPAN12O95859 305 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 FABP3P05413 133 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 ADH1AP07327 375 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 HMBSP08397 361 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 CNPP09543 421 aaKnown RBP15.4■□□□□ 0.06
HMGA1-202ENST00000347617 ITGA2P17301 1181 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 GADD45AP24522 165 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 OR1E1P30953 314 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 LIPAP38571 399 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 PIK3CBP42338 1070 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 SLC15A1P46059 708 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 ABRQ12979 859 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 GTF2H2Q13888 395 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 INO80DQ53TQ3 878 aaPredicted RBP15.4■□□□□ 0.06
HMGA1-202ENST00000347617 ADGRF1Q5T601 910 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 PPP2R2DQ66LE6 453 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 LAIR1Q6GTX8 287 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 GTF2H2CQ6P1K8 395 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 GCNT7Q6ZNI0 430 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 AHSA2Q719I0 299 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 GOLGA7Q7Z5G4 137 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 OR13C4Q8NGS5 318 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 NETO1Q8TDF5 533 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 KCNJ9Q92806 393 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 BADQ92934 168 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 HRASLS5Q96KN8 279 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 COL21A1Q96P44 957 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 TRIB3Q96RU7 358 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 ZBED2Q9BTP6 218 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 TBCDQ9BTW9 1192 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 C3orf14Q9HBI5 128 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 FBXL12Q9NXK8 326 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 FBXO10Q9UK96 956 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 CCL27Q9Y4X3 112 aa15.4■□□□□ 0.06
HMGA1-202ENST00000347617 NCF1BA6NI72 391 aaPredicted RBP15.39■□□□□ 0.05
HMGA1-202ENST00000347617 NCF1CA8MVU1 366 aaPredicted RBP15.39■□□□□ 0.05
HMGA1-202ENST00000347617 J3KR12 359 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 M0R082 166 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 WBP4O75554 376 aaKnown RBP15.39■□□□□ 0.05
HMGA1-202ENST00000347617 MFN2O95140 757 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 CXCL14O95715 111 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 CDK1P06493 297 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms