RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 MYLK4Q86YV6 388 aaPredicted RBP18.27■□□□□ 0.51
CHMP4A-201ENST00000347519 CRLF3Q8IUI8 442 aa18.27■□□□□ 0.51
CHMP4A-201ENST00000347519 PLD3Q8IV08 490 aa18.27■□□□□ 0.51
CHMP4A-201ENST00000347519 OR4K1Q8NGD4 311 aa18.27■□□□□ 0.51
CHMP4A-201ENST00000347519 NAT6Q93015 286 aa18.27■□□□□ 0.51
CHMP4A-201ENST00000347519 SLC22A18Q96BI1 424 aa18.27■□□□□ 0.51
CHMP4A-201ENST00000347519 AHCYL2Q96HN2 611 aaKnown RBP18.27■□□□□ 0.51
CHMP4A-201ENST00000347519 TGM7Q96PF1 710 aa18.27■□□□□ 0.51
CHMP4A-201ENST00000347519 NUDT22Q9BRQ3 303 aa18.27■□□□□ 0.51
CHMP4A-201ENST00000347519 PELI2Q9HAT8 420 aa18.27■□□□□ 0.51
CHMP4A-201ENST00000347519 FTSJ1Q9UET6 329 aa18.27■□□□□ 0.51
CHMP4A-201ENST00000347519 TRPS1Q9UHF7 1281 aa18.27■□□□□ 0.51
CHMP4A-201ENST00000347519 ZNF490Q9ULM2 529 aaPredicted RBP18.27■□□□□ 0.51
CHMP4A-201ENST00000347519 COL27A1Q8IZC6 1860 aaPredicted RBP18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 A0A0J9YY10 115 aa18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 CCNDBP1O95273 360 aa18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 RPLP0P05388 317 aaKnown RBP18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 JUNP05412 331 aaKnown RBP18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 HGFP14210 728 aa18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 JUPP14923 745 aa18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 MAGP20916 626 aa18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 RPL14P50914 215 aaKnown RBP18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 DUSP3P51452 185 aaPredicted RBP18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 GPLD1P80108 840 aa18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 CBX1P83916 185 aa18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 ZIC1Q15915 447 aa18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 CPSF6Q16630 551 aaKnown RBP eCLIP18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 GGTA1PQ4G0N0 100 aa18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 LIPJQ5W064 366 aa18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 KANK2Q63ZY3 851 aa18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 GRHL2Q6ISB3 625 aa18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 KLHL35Q6PF15 583 aa18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 SCIMPQ6UWF3 145 aa18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 MAVSQ7Z434 540 aa18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 PAQR7Q86WK9 346 aa18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 RNF175Q8N4F7 328 aa18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 MAP3K3Q99759 626 aa18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 RAB33BQ9H082 229 aa18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 LRRN3Q9H3W5 708 aa18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 EHD1Q9H4M9 534 aa18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 EPHA6Q9UF33 1036 aa18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 STK38LQ9Y2H1 464 aa18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 PTGDR2Q9Y5Y4 395 aa18.26■□□□□ 0.51
CHMP4A-201ENST00000347519 MDC1Q14676 2089 aaKnown RBP18.25■□□□□ 0.51
CHMP4A-201ENST00000347519 FEZF1A0PJY2 475 aa18.25■□□□□ 0.51
CHMP4A-201ENST00000347519 ZNF195O14628 629 aa18.25■□□□□ 0.51
CHMP4A-201ENST00000347519 HAT1O14929 419 aa18.25■□□□□ 0.51
CHMP4A-201ENST00000347519 TNFSF14O43557 240 aa18.25■□□□□ 0.51
CHMP4A-201ENST00000347519 DUX1O43812 170 aa18.25■□□□□ 0.51
CHMP4A-201ENST00000347519 ENO1P06733 434 aaKnown RBP18.25■□□□□ 0.51
CHMP4A-201ENST00000347519 ST6GAL1P15907 406 aa18.25■□□□□ 0.51
CHMP4A-201ENST00000347519 ACP1P24666 158 aa18.25■□□□□ 0.51
CHMP4A-201ENST00000347519 CCR8P51685 355 aa18.25■□□□□ 0.51
CHMP4A-201ENST00000347519 REEP5Q00765 189 aa18.25■□□□□ 0.51
CHMP4A-201ENST00000347519 ZRSR2Q15696 482 aaKnown RBP18.25■□□□□ 0.51
CHMP4A-201ENST00000347519 FIGLAQ6QHK4 219 aa18.25■□□□□ 0.51
CHMP4A-201ENST00000347519 ZNF574Q6ZN55 896 aaPredicted RBP18.25■□□□□ 0.51
CHMP4A-201ENST00000347519 PIP4P1Q86T03 277 aa18.25■□□□□ 0.51
CHMP4A-201ENST00000347519 CLYBLQ8N0X4 340 aa18.25■□□□□ 0.51
CHMP4A-201ENST00000347519 RFWD2Q8NHY2 731 aa18.25■□□□□ 0.51
CHMP4A-201ENST00000347519 METTL6Q8TCB7 284 aa18.25■□□□□ 0.51
CHMP4A-201ENST00000347519 PTCD3Q96EY7 689 aaKnown RBP18.25■□□□□ 0.51
CHMP4A-201ENST00000347519 PLCD4Q9BRC7 762 aa18.25■□□□□ 0.51
CHMP4A-201ENST00000347519 TUBB1Q9H4B7 451 aa18.25■□□□□ 0.51
CHMP4A-201ENST00000347519 EPB41L1Q9H4G0 881 aa18.25■□□□□ 0.51
CHMP4A-201ENST00000347519 FARSBQ9NSD9 589 aaKnown RBP18.25■□□□□ 0.51
CHMP4A-201ENST00000347519 KLHL3Q9UH77 587 aa18.25■□□□□ 0.51
CHMP4A-201ENST00000347519 BTRCQ9Y297 605 aa18.25■□□□□ 0.51
CHMP4A-201ENST00000347519 SPTBN4Q9H254 2564 aa18.25■□□□□ 0.51
CHMP4A-201ENST00000347519 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.24■□□□□ 0.51
CHMP4A-201ENST00000347519 MATN2O00339 956 aa18.24■□□□□ 0.51
CHMP4A-201ENST00000347519 MANBAO00462 879 aa18.24■□□□□ 0.51
CHMP4A-201ENST00000347519 LCMT2O60294 686 aaKnown RBP18.24■□□□□ 0.51
CHMP4A-201ENST00000347519 UGDHO60701 494 aa18.24■□□□□ 0.51
CHMP4A-201ENST00000347519 SNUPNO95149 360 aaKnown RBP18.24■□□□□ 0.51
CHMP4A-201ENST00000347519 UROSP10746 265 aa18.24■□□□□ 0.51
CHMP4A-201ENST00000347519 ACADVLP49748 655 aa18.24■□□□□ 0.51
CHMP4A-201ENST00000347519 SQSTM1Q13501 440 aa18.24■□□□□ 0.51
CHMP4A-201ENST00000347519 ADCK2Q7Z695 626 aa18.24■□□□□ 0.51
CHMP4A-201ENST00000347519 WDR75Q8IWA0 830 aaKnown RBP18.24■□□□□ 0.51
CHMP4A-201ENST00000347519 PIWIL2Q8TC59 973 aaKnown RBP18.24■□□□□ 0.51
CHMP4A-201ENST00000347519 MTFMTQ96DP5 389 aaKnown RBP18.24■□□□□ 0.51
CHMP4A-201ENST00000347519 TRAPPC9Q96Q05 1148 aa18.24■□□□□ 0.51
CHMP4A-201ENST00000347519 FAM107BQ9H098 131 aa18.24■□□□□ 0.51
CHMP4A-201ENST00000347519 EPN3Q9H201 632 aa18.24■□□□□ 0.51
CHMP4A-201ENST00000347519 SEMA6CQ9H3T2 930 aa18.24■□□□□ 0.51
CHMP4A-201ENST00000347519 TMEM184CQ9NVA4 438 aa18.24■□□□□ 0.51
CHMP4A-201ENST00000347519 KLK4Q9Y5K2 254 aa18.24■□□□□ 0.51
CHMP4A-201ENST00000347519 DNAJC15Q9Y5T4 150 aa18.24■□□□□ 0.51
CHMP4A-201ENST00000347519 IGHV5-51A0A0C4DH38 117 aa18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 OR2A25A4D2G3 310 aa18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 SLC9B1P1A6NJY1 282 aa18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 GIPC1O14908 333 aa18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 SKAP2O75563 359 aaPredicted RBP18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 CRCPO75575 148 aa18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 C9P02748 559 aa18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 CDH3P22223 829 aa18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 HMOX2P30519 316 aa18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 HNF4AP41235 474 aa18.23■□□□□ 0.51
CHMP4A-201ENST00000347519 NEK2P51955 445 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms