RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 SLC36A4Q6YBV0 504 aa20.68■□□□□ 0.9
TSPAN3-202ENST00000346495 RETREG3Q86VR2 466 aa20.68■□□□□ 0.9
TSPAN3-202ENST00000346495 FAM129CQ86XR2 697 aa20.68■□□□□ 0.9
TSPAN3-202ENST00000346495 ABHD11Q8NFV4 315 aa20.68■□□□□ 0.9
TSPAN3-202ENST00000346495 CXorf40BQ96DE9 158 aa20.68■□□□□ 0.9
TSPAN3-202ENST00000346495 SLC45A3Q96JT2 553 aa20.68■□□□□ 0.9
TSPAN3-202ENST00000346495 CDRT15Q96T59 188 aa20.68■□□□□ 0.9
TSPAN3-202ENST00000346495 AIF1LQ9BQI0 150 aa20.68■□□□□ 0.9
TSPAN3-202ENST00000346495 GID8Q9NWU2 228 aa20.68■□□□□ 0.9
TSPAN3-202ENST00000346495 RUVBL1Q9Y265 456 aaKnown RBP20.68■□□□□ 0.9
TSPAN3-202ENST00000346495 INVSQ9Y283 1065 aa20.68■□□□□ 0.9
TSPAN3-202ENST00000346495 PCDHB11Q9Y5F2 797 aa20.68■□□□□ 0.9
TSPAN3-202ENST00000346495 PCDHGA7Q9Y5G6 932 aa20.68■□□□□ 0.9
TSPAN3-202ENST00000346495 AXIN1O15169 862 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 EEDO75530 441 aaKnown RBP20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 SHMT2P34897 504 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 PIK3CBP42338 1070 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 CCR8P51685 355 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 PTGR1Q14914 329 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 KPNB1Q14974 876 aaKnown RBP20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 NOXRED1Q6NXP6 359 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 DEFB119Q8N690 84 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 MFSD2AQ8NA29 543 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 APOLD1Q96LR9 279 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 PITHD1Q9GZP4 211 aaPredicted RBP20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 MAP10Q9P2G4 905 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 ZNF624Q9P2J8 865 aaPredicted RBP20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 DLGAP4Q9Y2H0 992 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 PDE5AO76074 875 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 MYO1DO94832 1006 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 PSMB5P28074 263 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 CLDN8P56748 225 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 RPS13P62277 151 aaKnown RBP20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 MEF2AQ02078 507 aaPredicted RBP20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 RPL6Q02878 288 aaKnown RBP20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 C1orf146Q5VVC0 180 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 ICE2Q659A1 982 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 ADNP2Q6IQ32 1131 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 C8orf82Q6P1X6 216 aaPredicted RBP20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 PRMT9Q6P2P2 845 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 LAYNQ6UX15 382 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 TMIGD1Q6UXZ0 262 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 PARGQ86W56 976 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 WDR60Q8WVS4 1066 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 HOPXQ9BPY8 73 aaPredicted RBP20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 SPNS1Q9H2V7 528 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 NT5DC2Q9H857 520 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 DMRT3Q9NQL9 472 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 ADGRE2Q9UHX3 823 aa20.67■□□□□ 0.9
TSPAN3-202ENST00000346495 PRAMEF33A0A0G2JMD5 474 aa20.66■□□□□ 0.9
TSPAN3-202ENST00000346495 K7ESF4 209 aa20.66■□□□□ 0.9
TSPAN3-202ENST00000346495 CTSEP14091 401 aa20.66■□□□□ 0.9
TSPAN3-202ENST00000346495 SDC1P18827 310 aa20.66■□□□□ 0.9
TSPAN3-202ENST00000346495 SLC19A1P41440 591 aa20.66■□□□□ 0.9
TSPAN3-202ENST00000346495 DPP6P42658 865 aa20.66■□□□□ 0.9
TSPAN3-202ENST00000346495 PRDX1Q06830 199 aaKnown RBP20.66■□□□□ 0.9
TSPAN3-202ENST00000346495 ACSM2AQ08AH3 577 aa20.66■□□□□ 0.9
TSPAN3-202ENST00000346495 TLR1Q15399 786 aa20.66■□□□□ 0.9
TSPAN3-202ENST00000346495 SNCBQ16143 134 aa20.66■□□□□ 0.9
TSPAN3-202ENST00000346495 TIGD2Q4W5G0 525 aa20.66■□□□□ 0.9
TSPAN3-202ENST00000346495 SPIN4Q56A73 249 aa20.66■□□□□ 0.9
TSPAN3-202ENST00000346495 PIGGQ5H8A4 983 aa20.66■□□□□ 0.9
TSPAN3-202ENST00000346495 ACSM2BQ68CK6 577 aa20.66■□□□□ 0.9
TSPAN3-202ENST00000346495 IQCHQ86VS3 1027 aa20.66■□□□□ 0.9
TSPAN3-202ENST00000346495 OR4K1Q8NGD4 311 aa20.66■□□□□ 0.9
TSPAN3-202ENST00000346495 VPS33AQ96AX1 596 aa20.66■□□□□ 0.9
TSPAN3-202ENST00000346495 PPT2Q9UMR5 302 aa20.66■□□□□ 0.9
TSPAN3-202ENST00000346495 SLCO1B1Q9Y6L6 691 aa20.66■□□□□ 0.9
TSPAN3-202ENST00000346495 CD38P28907 300 aa20.65■□□□□ 0.9
TSPAN3-202ENST00000346495 CLNS1AP54105 237 aaKnown RBP20.65■□□□□ 0.9
TSPAN3-202ENST00000346495 ABATP80404 500 aa20.65■□□□□ 0.9
TSPAN3-202ENST00000346495 REEP5Q00765 189 aa20.65■□□□□ 0.9
TSPAN3-202ENST00000346495 FOXM1Q08050 763 aa20.65■□□□□ 0.9
TSPAN3-202ENST00000346495 RIPOR1Q6ZS17 1223 aa20.65■□□□□ 0.9
TSPAN3-202ENST00000346495 AMIGO1Q86WK6 493 aa20.65■□□□□ 0.9
TSPAN3-202ENST00000346495 HPS6Q86YV9 775 aa20.65■□□□□ 0.9
TSPAN3-202ENST00000346495 OR2A1Q8NGT9 310 aa20.65■□□□□ 0.9
TSPAN3-202ENST00000346495 ZFPM2Q8WW38 1151 aa20.65■□□□□ 0.9
TSPAN3-202ENST00000346495 LCN9Q8WX39 176 aa20.65■□□□□ 0.9
TSPAN3-202ENST00000346495 TCEAL2Q9H3H9 227 aaPredicted RBP20.65■□□□□ 0.9
TSPAN3-202ENST00000346495 CLMPQ9H6B4 373 aa20.65■□□□□ 0.9
TSPAN3-202ENST00000346495 SPAG4Q9NPE6 437 aa20.65■□□□□ 0.9
TSPAN3-202ENST00000346495 CUEDC1Q9NWM3 386 aaPredicted RBP20.65■□□□□ 0.9
TSPAN3-202ENST00000346495 ADA2Q9NZK5 511 aa20.65■□□□□ 0.9
TSPAN3-202ENST00000346495 OR6C2Q9NZP2 312 aa20.65■□□□□ 0.9
TSPAN3-202ENST00000346495 TAAR2Q9P1P5 351 aa20.65■□□□□ 0.9
TSPAN3-202ENST00000346495 KLF15Q9UIH9 416 aa20.65■□□□□ 0.9
TSPAN3-202ENST00000346495 CEP192Q8TEP8 1941 aa20.65■□□□□ 0.9
TSPAN3-202ENST00000346495 A0A1W2PR77 199 aa20.64■□□□□ 0.9
TSPAN3-202ENST00000346495 ASPDHA6ND91 283 aa20.64■□□□□ 0.9
TSPAN3-202ENST00000346495 OR5K4A6NMS3 321 aa20.64■□□□□ 0.9
TSPAN3-202ENST00000346495 PRICKLE3O43900 615 aaPredicted RBP20.64■□□□□ 0.9
TSPAN3-202ENST00000346495 ENTPD5O75356 428 aa20.64■□□□□ 0.9
TSPAN3-202ENST00000346495 CCNDBP1O95273 360 aa20.64■□□□□ 0.9
TSPAN3-202ENST00000346495 ETHE1O95571 254 aa20.64■□□□□ 0.9
TSPAN3-202ENST00000346495 NPPAP01160 153 aa20.64■□□□□ 0.9
TSPAN3-202ENST00000346495 IL6P05231 212 aa20.64■□□□□ 0.9
TSPAN3-202ENST00000346495 SERPINB1P30740 379 aa20.64■□□□□ 0.9
TSPAN3-202ENST00000346495 RACK1P63244 317 aaKnown RBP20.64■□□□□ 0.9
TSPAN3-202ENST00000346495 YBX1P67809 324 aaKnown RBP20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms