RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 HPCAP84074 193 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 MYBPC3Q14896 1274 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 ACOX1Q15067 660 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 ZNF658BQ4V348 819 aaPredicted RBP14.93□□□□□ -0.02
UPF3B-202ENST00000345865 LRRC23Q53EV4 343 aaPredicted RBP14.93□□□□□ -0.02
UPF3B-202ENST00000345865 TTC23Q5W5X9 447 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 GRHL2Q6ISB3 625 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 MSANTD1Q6ZTZ1 278 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 TRIM74Q86UV6 250 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 DCP2Q8IU60 420 aaKnown RBP14.93□□□□□ -0.02
UPF3B-202ENST00000345865 ZDHHC21Q8IVQ6 265 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 ZZZ3Q8IYH5 903 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 EID3Q8N140 333 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 VN1R2Q8NFZ6 395 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 GLMNQ92990 594 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 TIFAQ96CG3 184 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 CCM2Q9BSQ5 444 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 ADNPQ9H2P0 1102 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 EXD2Q9NVH0 621 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 ATXN10Q9UBB4 475 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 TCF20Q9UGU0 1960 aaKnown RBP14.93□□□□□ -0.02
UPF3B-202ENST00000345865 H0YIV9 168 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 K7ESM1 405 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 FOXD2O60548 495 aaPredicted RBP14.93□□□□□ -0.02
UPF3B-202ENST00000345865 MITFO75030 526 aaPredicted RBP14.93□□□□□ -0.02
UPF3B-202ENST00000345865 ATG13O75143 517 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 CCNDBP1O95273 360 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 CPSF4O95639 269 aaKnown RBP14.93□□□□□ -0.02
UPF3B-202ENST00000345865 SOD1P00441 154 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 CEBPBP17676 345 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 XPAP23025 273 aaPredicted RBP14.93□□□□□ -0.02
UPF3B-202ENST00000345865 NNMTP40261 264 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 HNRNPFP52597 415 aaKnown RBP14.93□□□□□ -0.02
UPF3B-202ENST00000345865 SRSF11Q05519 484 aaKnown RBP14.93□□□□□ -0.02
UPF3B-202ENST00000345865 PIGFQ07326 219 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 CD47Q08722 323 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 DHCR24Q15392 516 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 LDLRAP1Q5SW96 308 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 CPZQ66K79 652 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 CEP68Q76N32 757 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 VTCN1Q7Z7D3 282 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 OR8J2Q8NGG1 315 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 OR56A3Q8NH54 315 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 CCDC138Q96M89 665 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 C11orf49Q9H6J7 331 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 FANCEQ9HB96 536 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 SGK2Q9HBY8 427 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 DKK3Q9UBP4 350 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 LOC100130705A0A1B0GUX0 176 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 GABRR3A8MPY1 467 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 EVPLLA8MZ36 301 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 DIRAS1O95057 198 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 ISL1P61371 349 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 ACSM2AQ08AH3 577 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 VMACQ2NL98 169 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 C6orf141Q5SZD1 244 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 ACSM2BQ68CK6 577 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 XKR5Q6UX68 686 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 CYP4Z1Q86W10 505 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 C1orf52Q8N6N3 182 aaKnown RBP14.92□□□□□ -0.02
UPF3B-202ENST00000345865 ZNF557Q8N988 423 aaPredicted RBP14.92□□□□□ -0.02
UPF3B-202ENST00000345865 OR7G3Q8NG95 312 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 OR13F1Q8NGS4 319 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 SPPL3Q8TCT6 385 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 NEIL2Q969S2 332 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 SH3KBP1Q96B97 665 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 IL23AQ9NPF7 189 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 CDH7Q9ULB5 785 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 SH2B3Q9UQQ2 575 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 RUVBL1Q9Y265 456 aaKnown RBP14.92□□□□□ -0.02
UPF3B-202ENST00000345865 INSL6Q9Y581 213 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 A0A1W2PPW3 197 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 CD247P20963 164 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 RANBP2P49792 3224 aaKnown RBP14.92□□□□□ -0.02
UPF3B-202ENST00000345865 MAPK10P53779 464 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 CAMK1Q14012 370 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 DPY19L1Q2PZI1 675 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 FGD3Q5JSP0 725 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 DHRS4L2Q6PKH6 230 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 FKBP9P1Q75LS8 142 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 NLRP8Q86W28 1048 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 HUS1BQ8NHY5 278 aa14.92□□□□□ -0.02
UPF3B-202ENST00000345865 ZNF420Q8TAQ5 688 aaPredicted RBP14.92□□□□□ -0.02
UPF3B-202ENST00000345865 HDAC2Q92769 488 aaKnown RBP14.92□□□□□ -0.02
UPF3B-202ENST00000345865 MAGEB10Q96LZ2 347 aaPredicted RBP14.92□□□□□ -0.02
UPF3B-202ENST00000345865 TRIM64BA6NI03 449 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 PLK4O00444 970 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 KPNA3O00505 521 aaPredicted RBP14.91□□□□□ -0.02
UPF3B-202ENST00000345865 PRMT3O60678 531 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 FGF19O95750 216 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 CATP04040 527 aaKnown RBP14.91□□□□□ -0.02
UPF3B-202ENST00000345865 SEMG1P04279 462 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 CYP17A1P05093 508 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 NUDT7P0C024 238 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 TTKP33981 857 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 CTNNB1P35222 781 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 HNF4AP41235 474 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 DGKGP49619 791 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 CRYBA2P53672 197 aa14.91□□□□□ -0.02
UPF3B-202ENST00000345865 VLDLRP98155 873 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms