RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 PRKYO43930 277 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 TBL1XO60907 577 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 S1PR4O95977 384 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 PCSK6P29122 969 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 DGKGP49619 791 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 AP1S2P56377 157 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 PEG10Q86TG7 708 aaKnown RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 CNTN4Q8IWV2 1026 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 TOMM5Q8N4H5 51 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 LRCH3Q96II8 777 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 EPYCQ99645 322 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 MROQ9BYG7 248 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 PRDM5Q9NQX1 630 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 KIAA1522Q9P206 1035 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 STOX2Q9P2F5 926 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 BCAS1O75363 584 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 F7P08709 466 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 HOXD8P13378 290 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 PSMD8P48556 350 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 GRSF1Q12849 480 aaKnown RBP eCLIP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 PTGR1Q14914 329 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 SPANXN4Q5MJ08 99 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 DPY19L3Q6ZPD9 716 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ARFGAP1Q8N6T3 406 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 OR13F1Q8NGS4 319 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 IMP4Q96G21 291 aaKnown RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 WACQ9BTA9 647 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ZSCAN5AQ9BUG6 496 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 EBPLQ9BY08 206 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 PDGFDQ9GZP0 370 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 TPT1P8Q9HAU6 139 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 A0A0X1KG70 313 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 OR51F1A6NGY5 319 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 SOBPA7XYQ1 873 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 CLCA1A8K7I4 914 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 PDHXO00330 501 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ACOT8O14734 319 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 GNB5O14775 395 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 NIPSNAP2O75323 286 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 HLA-DPB1P04440 258 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 KCNE1P15382 129 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 DCDC1P59894 354 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 PPP1R8Q12972 351 aaKnown RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 SPHARQ15513 63 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ZNHIT3Q15649 155 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 GPR33Q49SQ1 333 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ZNF311Q5JNZ3 666 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 CHMP1BQ7LBR1 199 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 PARP16Q8N5Y8 322 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 INO80EQ8NBZ0 244 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 PGAP3Q96FM1 320 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 VMP1Q96GC9 406 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 HAPLN2Q9GZV7 340 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 CALML5Q9NZT1 146 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 PRKAG2Q9UGJ0 569 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 HCN4Q9Y3Q4 1203 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 UGT2A1Q9Y4X1 527 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 CCL22O00626 93 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 GPX3P22352 226 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 PPIGQ13427 754 aaKnown RBP eCLIP4.65□□□□□ -1.66
CSMD3-203ENST00000343508 UNC50Q53HI1 259 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 KHDRBS2Q5VWX1 349 aaKnown RBP4.65□□□□□ -1.66
CSMD3-203ENST00000343508 SPAG16Q8N0X2 631 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 LILRB4Q8NHJ6 448 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 ZFP90Q8TF47 636 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 MSANTD3Q96H12 275 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 SPON1Q9HCB6 807 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 C14orf105Q9NVL8 296 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 ERVK-18Q9QC07 812 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 ABCA3Q99758 1704 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 TRIM3O75382 744 aaPredicted RBP4.65□□□□□ -1.66
CSMD3-203ENST00000343508 BMP1P13497 986 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 PRR5P85299 388 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 EMX1Q04741 257 aaPredicted RBP4.65□□□□□ -1.66
CSMD3-203ENST00000343508 EN1Q05925 392 aaPredicted RBP4.65□□□□□ -1.66
CSMD3-203ENST00000343508 ZBTB6Q15916 424 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 ALFQ53S48 1182 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 MSANTD1Q6ZTZ1 278 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 GPR142Q7Z601 462 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 CHPFQ8IZ52 775 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 ESAMQ96AP7 390 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 RAD51AP1Q96B01 352 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 PLD4Q96BZ4 506 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 CDH7Q9ULB5 785 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 GTF2A1LQ9UNN4 478 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 PLSCR1O15162 318 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 CORO1AP31146 461 aaKnown RBP4.65□□□□□ -1.66
CSMD3-203ENST00000343508 ZNF81P51508 661 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 RAPSNQ13702 412 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 CYBRD1Q53TN4 286 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 NHSL2Q5HYW2 709 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 SNAP47Q5SQN1 464 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 ISCA2Q86U28 154 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 FAM20CQ8IXL6 584 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 SNIP1Q8TAD8 396 aaKnown RBP4.65□□□□□ -1.66
CSMD3-203ENST00000343508 BPIFB1Q8TDL5 484 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 MUL1Q969V5 352 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 HSH2DQ96JZ2 352 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 AIG1Q9NVV5 245 aa4.65□□□□□ -1.66
CSMD3-203ENST00000343508 AP1M2Q9Y6Q5 423 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms