RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 GJA8P48165 433 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 AP1S1P61966 158 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 EMX1Q04741 257 aaPredicted RBP12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 ANGPT1Q15389 498 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 C5orf22Q49AR2 442 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 Q6ZSR9 355 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 Q6ZVL8 140 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 DNAJB7Q7Z6W7 309 aaPredicted RBP12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 C10orf53Q8N6V4 93 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 TSPEARQ8WU66 669 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 DEFB118Q96PH6 123 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 FEVQ99581 238 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 SLC35A5Q9BS91 424 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 GPR83Q9NYM4 423 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 KIAA1522Q9P206 1035 aaPredicted RBP12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 ENOPH1Q9UHY7 261 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 RUVBL1Q9Y265 456 aaKnown RBP12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 SAGE2PA6NJ88 616 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 HAT1O14929 419 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 SYN3O14994 580 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 ZW10O43264 779 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 AP1G1O43747 822 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 CCNB2O95067 398 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 FSHRP23945 695 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 GSTM2P28161 218 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 ALDH3B2P48448 385 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 SLC11A1P49279 550 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 COX10Q12887 443 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 CRTC2Q53ET0 693 aaPredicted RBP12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 CXorf57Q6NSI4 855 aaKnown RBP12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 DCP2Q8IU60 420 aaKnown RBP12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 SCAIQ8N9R8 606 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 CHDHQ8NE62 594 aaPredicted RBP12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 SH3YL1Q96HL8 342 aaPredicted RBP12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 ZNF222Q9UK12 451 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 ASB1Q9Y576 335 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 PEX16Q9Y5Y5 336 aa12.07□□□□□ -0.48
SNRNP48-201ENST00000342415 NHSQ6T4R5 1651 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 ACOX3O15254 700 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 SEPT4O43236 478 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 KDELR3O43731 214 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 CH25HO95992 272 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 FUCA1P04066 466 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 EBLN1P0CF75 366 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 BDKRB1P46663 353 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 PHC1P78364 1004 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 DCST1Q5T197 706 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 LYPLAL1Q5VWZ2 237 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 CAPN13Q6MZZ7 669 aaPredicted RBP12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 LMNTD1Q8N9Z9 388 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 OR8J3Q8NGG0 315 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 APIPQ96GX9 242 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 ZBTB20Q9HC78 741 aaPredicted RBP12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 KLHL28Q9NXS3 571 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 A0A1W2PRU2 124 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 MBLAC1A4D2B0 266 aaPredicted RBP12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 FABP12A6NFH5 140 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 KLK1P06870 262 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 ATXN1LP0C7T5 689 aaKnown RBP12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 HTR1BP28222 390 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 HNF1BP35680 557 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 CENPAP49450 140 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 DUOXA1Q1HG43 343 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 VMACQ2NL98 169 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 RAB41Q5JT25 222 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 USP43Q70EL4 1123 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 AQP11Q8NBQ7 271 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 TRNT1Q96Q11 434 aaKnown RBP12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 MS4A12Q9NXJ0 267 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 DLGAP4Q9Y2H0 992 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 SPIN1Q9Y657 262 aaPredicted RBP12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 ALPPL2P10696 532 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 MTHFD2P13995 350 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 NPRL3Q12980 569 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 SCARB2Q14108 478 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 IQCCQ4KMZ1 466 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 RTP2Q5QGT7 225 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 FAM171BQ6P995 826 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 CCBE1Q6UXH8 406 aaPredicted RBP12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 ISL2Q96A47 359 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 POLR2J3Q9H1A7 115 aaKnown RBP12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 ITGB1BP2Q9UKP3 347 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 PCDHA9Q9Y5H5 950 aa12.06□□□□□ -0.48
SNRNP48-201ENST00000342415 TRBV23OR9-2A0A075B6M9 112 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 B3GALT4O96024 378 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 RPS17P08708 135 aaKnown RBP12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 FAM163BP0C2L3 166 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 GADD45AP24522 165 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 TACR1P25103 407 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 RPS26P62854 115 aaKnown RBP12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 FNDC3BQ53EP0 1204 aaKnown RBP12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 ARHGAP15Q53QZ3 475 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 MED27Q6P2C8 311 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 YAF2Q8IY57 180 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 PGBD3Q8N328 593 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 NCSTNQ92542 709 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 COL21A1Q96P44 957 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 TUBA1CQ9BQE3 449 aa12.05□□□□□ -0.48
SNRNP48-201ENST00000342415 TRBC2A0A5B9 178 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms