RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 KCNC2Q96PR1 638 aa7.05□□□□□ -1.28
PTPRR-202ENST00000342084 BTBD2Q9BX70 525 aa7.05□□□□□ -1.28
PTPRR-202ENST00000342084 TMEM121BQ9BXQ6 578 aaPredicted RBP7.05□□□□□ -1.28
PTPRR-202ENST00000342084 IL21Q9HBE4 155 aa7.05□□□□□ -1.28
PTPRR-202ENST00000342084 AMBNQ9NP70 447 aa7.05□□□□□ -1.28
PTPRR-202ENST00000342084 IL1RAPQ9NPH3 570 aa7.05□□□□□ -1.28
PTPRR-202ENST00000342084 AKIP1Q9NQ31 210 aa7.05□□□□□ -1.28
PTPRR-202ENST00000342084 B4GALT6Q9UBX8 382 aa7.05□□□□□ -1.28
PTPRR-202ENST00000342084 SAMD4AQ9UPU9 718 aaKnown RBP7.05□□□□□ -1.28
PTPRR-202ENST00000342084 INSL5Q9Y5Q6 135 aa7.05□□□□□ -1.28
PTPRR-202ENST00000342084 NUP214P35658 2090 aaPredicted RBP7.04□□□□□ -1.28
PTPRR-202ENST00000342084 KRBA1A5PL33 1030 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 SOBPA7XYQ1 873 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 MAGEB17A8MXT2 336 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 EVPLLA8MZ36 301 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 CLDN25C9JDP6 229 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 M0R129 80 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 GABARAPO95166 117 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 CCNDBP1O95273 360 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 GBAP04062 536 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 SEMG1P04279 462 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 HIST1H2AGP0C0S8 130 aaPredicted RBP7.04□□□□□ -1.28
PTPRR-202ENST00000342084 CCDC159P0C7I6 412 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 OR56A5P0C7T3 313 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 IMPDH2P12268 514 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 HIST1H2ADP20671 130 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 CDH3P22223 829 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 KDELR2P33947 212 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 BDKRB1P46663 353 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 PREPP48147 710 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 SLC35A2P78381 396 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 GAB1Q13480 694 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 DNASE1L3Q13609 305 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 ZNF846Q147U1 533 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 MAD2L1BPQ15013 274 aaPredicted RBP7.04□□□□□ -1.28
PTPRR-202ENST00000342084 SYT16Q17RD7 645 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 HKDC1Q2TB90 917 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 GPR33Q49SQ1 333 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 XKR6Q5GH73 641 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.04□□□□□ -1.28
PTPRR-202ENST00000342084 PAGE2BQ5JRK9 111 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 PRSS36Q5K4E3 855 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 CATSPEREQ5SY80 951 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 ASTLQ6HA08 431 aaPredicted RBP7.04□□□□□ -1.28
PTPRR-202ENST00000342084 CAPN13Q6MZZ7 669 aaPredicted RBP7.04□□□□□ -1.28
PTPRR-202ENST00000342084 C22orf39Q6P5X5 142 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 DPY19L3Q6ZPD9 716 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 RNF165Q6ZSG1 346 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 TPRG1Q6ZUI0 275 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 Q6ZVU0 165 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 USP45Q70EL2 814 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 DSG4Q86SJ6 1040 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 GALNT13Q8IUC8 556 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 RBM12BQ8IXT5 1001 aaKnown RBP7.04□□□□□ -1.28
PTPRR-202ENST00000342084 RNF168Q8IYW5 571 aaPredicted RBP7.04□□□□□ -1.28
PTPRR-202ENST00000342084 ZBTB8BQ8NAP8 495 aaPredicted RBP7.04□□□□□ -1.28
PTPRR-202ENST00000342084 APH1BQ8WW43 257 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 ELMO1Q92556 727 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 DNASE1L2Q92874 299 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 TESCQ96BS2 214 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 TAMM41Q96BW9 452 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 PPP1R14BQ96C90 147 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 SCRN2Q96FV2 425 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 MED8Q96G25 268 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 TRMT2BQ96GJ1 504 aaKnown RBP7.04□□□□□ -1.28
PTPRR-202ENST00000342084 HIST1H2AHQ96KK5 128 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 SAMD11Q96NU1 681 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 ZNF347Q96SE7 839 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 HIST1H2AJQ99878 128 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 H2AFJQ9BTM1 129 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 SLC12A9Q9BXP2 914 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 GABARAPL1Q9H0R8 117 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 MTG2Q9H4K7 406 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 TMEM165Q9HC07 324 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 TM9SF3Q9HD45 589 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 KRT84Q9NSB2 600 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 DNAJC11Q9NVH1 559 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 THUMPD1Q9NXG2 353 aaKnown RBP7.04□□□□□ -1.28
PTPRR-202ENST00000342084 SRRDQ9UH36 339 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 SLCO3A1Q9UIG8 710 aa7.04□□□□□ -1.28
PTPRR-202ENST00000342084 AGAP14A8MT82 685 aa7.03□□□□□ -1.28
PTPRR-202ENST00000342084 M0R3G1 203 aa7.03□□□□□ -1.28
PTPRR-202ENST00000342084 PCDHGA12O60330 932 aa7.03□□□□□ -1.28
PTPRR-202ENST00000342084 SCN2BO60939 215 aa7.03□□□□□ -1.28
PTPRR-202ENST00000342084 WBP4O75554 376 aaKnown RBP7.03□□□□□ -1.28
PTPRR-202ENST00000342084 JRKO75564 520 aa7.03□□□□□ -1.28
PTPRR-202ENST00000342084 SERPINB7O75635 380 aa7.03□□□□□ -1.28
PTPRR-202ENST00000342084 EPN2O95208 641 aa7.03□□□□□ -1.28
PTPRR-202ENST00000342084 SOD2P04179 222 aa7.03□□□□□ -1.28
PTPRR-202ENST00000342084 CBSLP0DN79 551 aa7.03□□□□□ -1.28
PTPRR-202ENST00000342084 PORP16435 677 aaPredicted RBP7.03□□□□□ -1.28
PTPRR-202ENST00000342084 PBLDP30039 288 aaPredicted RBP7.03□□□□□ -1.28
PTPRR-202ENST00000342084 HLA-FP30511 346 aa7.03□□□□□ -1.28
PTPRR-202ENST00000342084 DNAJA1P31689 397 aaKnown RBP7.03□□□□□ -1.28
PTPRR-202ENST00000342084 CBSP35520 551 aa7.03□□□□□ -1.28
PTPRR-202ENST00000342084 NUDT6P53370 316 aa7.03□□□□□ -1.28
PTPRR-202ENST00000342084 EPHB3P54753 998 aa7.03□□□□□ -1.28
PTPRR-202ENST00000342084 IRF8Q02556 426 aa7.03□□□□□ -1.28
PTPRR-202ENST00000342084 KCNC4Q03721 635 aa7.03□□□□□ -1.28
PTPRR-202ENST00000342084 TSTA3Q13630 321 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms