RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 SERGEFQ9UGK8 458 aa14.65□□□□□ -0.06
BRAT1-201ENST00000340611 TRPM6Q9BX84 2022 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 TRIM64BA6NI03 449 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 UPK3BL1B0FP48 263 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 B8ZZF3 427 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 UPK3BL2E5RIL1 263 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 ANHXE9PGG2 379 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 SPINT1O43278 529 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 RHOBTB1O94844 696 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 NAGAP17050 411 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 ATP5F1P24539 256 aaPredicted RBP14.64□□□□□ -0.07
BRAT1-201ENST00000340611 CTHP32929 405 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 ARHGEF7Q14155 803 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 TYSND1Q2T9J0 566 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 ATAD3CQ5T2N8 411 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 HID1Q8IV36 788 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 C3orf30Q96M34 536 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 ALOXE3Q9BYJ1 711 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 THAP10Q9P2Z0 257 aaPredicted RBP14.64□□□□□ -0.07
BRAT1-201ENST00000340611 IKZF3Q9UKT9 509 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 PIAS3Q9Y6X2 628 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 PLXNB3Q9ULL4 1909 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 A8MT66 165 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 M0R3G1 203 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 POLR1CO15160 346 aaPredicted RBP14.64□□□□□ -0.07
BRAT1-201ENST00000340611 GSNP06396 782 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 FASP25445 335 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 SLC9A3P48764 834 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 CLCN5P51795 746 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 GRSF1Q12849 480 aaKnown RBP eCLIP14.64□□□□□ -0.07
BRAT1-201ENST00000340611 COL19A1Q14993 1142 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 FAM83EQ2M2I3 478 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 PAQR3Q6TCH7 311 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 MTSS1LQ765P7 747 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 GPR150Q8NGU9 434 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 LILRB1Q8NHL6 650 aaPredicted RBP14.64□□□□□ -0.07
BRAT1-201ENST00000340611 NRBF2Q96F24 287 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 MRPL57Q9BQC6 102 aaKnown RBP14.64□□□□□ -0.07
BRAT1-201ENST00000340611 MEAF6Q9HAF1 191 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 AGPAT4Q9NRZ5 378 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 CRLS1Q9UJA2 301 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 TMPRSS11EQ9UL52 423 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 SPEGQ15772 3267 aa14.64□□□□□ -0.07
BRAT1-201ENST00000340611 EDDM13A0A1B0GTR0 161 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 A8MUA0 341 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 ATP6V1G2-DDX39BF2Z307 99 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 SNAP29O95721 258 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 NCK1P16333 377 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 IL10P22301 178 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 OR3A3P47888 321 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 ZFP69Q49AA0 526 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 TMEM31Q5JXX7 168 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 INTS11Q5TA45 600 aaKnown RBP14.63□□□□□ -0.07
BRAT1-201ENST00000340611 FAM45BPQ6NSW5 357 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 NDNFQ8TB73 568 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 FAM45AQ8TCE6 357 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 OR8D1Q8WZ84 308 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 GLMNQ92990 594 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 CD93Q9NPY3 652 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 PNMA8BQ9ULN7 279 aaPredicted RBP14.63□□□□□ -0.07
BRAT1-201ENST00000340611 CENPXA8MT69 81 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 H3BMM5 538 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 UBFD1O14562 309 aaKnown RBP14.63□□□□□ -0.07
BRAT1-201ENST00000340611 INPP4BO15327 924 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 MID1O15344 667 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 MMP20O60882 483 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 ALDOCP09972 364 aaKnown RBP14.63□□□□□ -0.07
BRAT1-201ENST00000340611 PSMA4P25789 261 aaKnown RBP14.63□□□□□ -0.07
BRAT1-201ENST00000340611 GTF2E2P29084 291 aaKnown RBP14.63□□□□□ -0.07
BRAT1-201ENST00000340611 CD40LGP29965 261 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 SPAM1P38567 509 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 SPINT3P49223 89 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 POU4F1Q01851 419 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 EIF4HQ15056 248 aaKnown RBP14.63□□□□□ -0.07
BRAT1-201ENST00000340611 CDK10Q15131 360 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 AGAP9Q5VTM2 703 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 BRAT1Q6PJG6 821 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 CYHR1Q6ZMK1 362 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 PAGE2Q7Z2X7 111 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 DDIASQ8IXT1 998 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 MFSD4AQ8N468 514 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 DHRSXQ8N5I4 330 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 LSM14AQ8ND56 463 aaKnown RBP14.63□□□□□ -0.07
BRAT1-201ENST00000340611 ANGPTL6Q8NI99 470 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 NECTIN4Q96NY8 510 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 AIFM2Q9BRQ8 373 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 AARSD1Q9BTE6 412 aaKnown RBP14.63□□□□□ -0.07
BRAT1-201ENST00000340611 ALG9Q9H6U8 611 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 IGSF5Q9NSI5 407 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 MAP10Q9P2G4 905 aa14.63□□□□□ -0.07
BRAT1-201ENST00000340611 A0A0X1KG70 313 aa14.62□□□□□ -0.07
BRAT1-201ENST00000340611 K7ESM1 405 aa14.62□□□□□ -0.07
BRAT1-201ENST00000340611 ACOX3O15254 700 aa14.62□□□□□ -0.07
BRAT1-201ENST00000340611 KCNJ13O60928 360 aa14.62□□□□□ -0.07
BRAT1-201ENST00000340611 OGNP20774 298 aaKnown RBP14.62□□□□□ -0.07
BRAT1-201ENST00000340611 CBLP22681 906 aa14.62□□□□□ -0.07
BRAT1-201ENST00000340611 CDH13P55290 713 aa14.62□□□□□ -0.07
BRAT1-201ENST00000340611 POLR2LP62875 67 aaKnown RBP14.62□□□□□ -0.07
BRAT1-201ENST00000340611 CACNG1Q06432 222 aa14.62□□□□□ -0.07
BRAT1-201ENST00000340611 CNTN1Q12860 1018 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms