RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 SLC22A11Q9NSA0 550 aa14.72□□□□□ -0.05
VAPA-201ENST00000340541 ABCF3Q9NUQ8 709 aa14.72□□□□□ -0.05
VAPA-201ENST00000340541 TXNDC16Q9P2K2 825 aa14.72□□□□□ -0.05
VAPA-201ENST00000340541 NOVA2Q9UNW9 492 aaKnown RBP14.72□□□□□ -0.05
VAPA-201ENST00000340541 FARSAQ9Y285 508 aaKnown RBP14.72□□□□□ -0.05
VAPA-201ENST00000340541 COL12A1Q99715 3063 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 CLEC18AA5D8T8 446 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 NPEPPSL1A6NEC2 478 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 CYSRT1A8MQ03 144 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 PHGDHO43175 533 aaKnown RBP14.71□□□□□ -0.05
VAPA-201ENST00000340541 HIST1H2AGP0C0S8 130 aaPredicted RBP14.71□□□□□ -0.05
VAPA-201ENST00000340541 HIST1H2ADP20671 130 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 VSX2P58304 361 aaPredicted RBP14.71□□□□□ -0.05
VAPA-201ENST00000340541 RPS15P62841 145 aaKnown RBP14.71□□□□□ -0.05
VAPA-201ENST00000340541 RELAQ04206 551 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 NAB1Q13506 487 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 NAE1Q13564 534 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 IL10RAQ13651 578 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 ERV3-1Q14264 604 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 NCF4Q15080 339 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 WASHC2DQ5SRD0 308 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 GRTP1Q5TC63 336 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 PRAMEF13Q5VWM6 474 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 CLEC18BQ6UXF7 455 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 SYVN1Q86TM6 617 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 APLFQ8IW19 511 aaPredicted RBP14.71□□□□□ -0.05
VAPA-201ENST00000340541 CLEC18CQ8NCF0 446 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 LRRN4CLQ8ND94 238 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 OR56A3Q8NH54 315 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 IFT81Q8WYA0 676 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 FBXL8Q96CD0 374 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 HIST1H2AHQ96KK5 128 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 OR2A5Q96R48 311 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 HIST1H2AJQ99878 128 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 H2AFJQ9BTM1 129 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 NDC1Q9BTX1 674 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 FUT8Q9BYC5 575 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 IRAK4Q9NWZ3 460 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 ARL15Q9NXU5 204 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 MTRF1LQ9UGC7 380 aaKnown RBP14.71□□□□□ -0.05
VAPA-201ENST00000340541 SNX7Q9UNH6 387 aa14.71□□□□□ -0.05
VAPA-201ENST00000340541 PCSK5Q92824 1860 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 H0YGG7 62 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 H7BY64 318 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 HAT1O14929 419 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 CNOT3O75175 753 aaKnown RBP14.7□□□□□ -0.06
VAPA-201ENST00000340541 KLF7O75840 302 aaPredicted RBP14.7□□□□□ -0.06
VAPA-201ENST00000340541 ONECUT2O95948 504 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 EZRP15311 586 aaKnown RBP14.7□□□□□ -0.06
VAPA-201ENST00000340541 NPPBP16860 134 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 AGXTP21549 392 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 SPRP35270 261 aaPredicted RBP14.7□□□□□ -0.06
VAPA-201ENST00000340541 ARSFP54793 590 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 ARF3P61204 181 aaPredicted RBP14.7□□□□□ -0.06
VAPA-201ENST00000340541 DCDP81605 110 aaKnown RBP14.7□□□□□ -0.06
VAPA-201ENST00000340541 USP10Q14694 798 aaKnown RBP14.7□□□□□ -0.06
VAPA-201ENST00000340541 GRM7Q14831 915 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 TSNQ15631 228 aaKnown RBP14.7□□□□□ -0.06
VAPA-201ENST00000340541 UGT8Q16880 541 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 PRTGQ2VWP7 1150 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 NKAIN1Q4KMZ8 207 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 THEMIS2Q5TEJ8 643 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 YOD1Q5VVQ6 348 aaPredicted RBP14.7□□□□□ -0.06
VAPA-201ENST00000340541 LCTLQ6UWM7 567 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 TTLL10Q6ZVT0 673 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 SPATA6LQ8N4H0 392 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 ARHGEF39Q8N4T4 335 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 DTWD1Q8N5C7 304 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 ADAMTS17Q8TE56 1095 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 TSPAN17Q96FV3 270 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 UBXN10Q96LJ8 280 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 PRAP1Q96NZ9 151 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 OR4K3Q96R72 315 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 FMO2Q99518 471 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 TRIM54Q9BYV2 358 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 DERL2Q9GZP9 239 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 PCBD2Q9H0N5 130 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 CDC42EP4Q9H3Q1 356 aaKnown RBP14.7□□□□□ -0.06
VAPA-201ENST00000340541 CUTCQ9NTM9 273 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 TXLNGQ9NUQ3 528 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 UTP6Q9NYH9 597 aaKnown RBP14.7□□□□□ -0.06
VAPA-201ENST00000340541 TCFL5Q9UL49 500 aa14.7□□□□□ -0.06
VAPA-201ENST00000340541 A0A1B0GX78 115 aa14.69□□□□□ -0.06
VAPA-201ENST00000340541 HYKKA2RU49 373 aa14.69□□□□□ -0.06
VAPA-201ENST00000340541 HMX2A2RU54 273 aa14.69□□□□□ -0.06
VAPA-201ENST00000340541 CDC14CA4D256 554 aa14.69□□□□□ -0.06
VAPA-201ENST00000340541 DSCR3O14972 297 aa14.69□□□□□ -0.06
VAPA-201ENST00000340541 RFPL1O75677 317 aa14.69□□□□□ -0.06
VAPA-201ENST00000340541 GUCA1CO95843 209 aa14.69□□□□□ -0.06
VAPA-201ENST00000340541 STMN1P16949 149 aa14.69□□□□□ -0.06
VAPA-201ENST00000340541 CCND1P24385 295 aa14.69□□□□□ -0.06
VAPA-201ENST00000340541 GMPRP36959 345 aa14.69□□□□□ -0.06
VAPA-201ENST00000340541 CD97P48960 835 aa14.69□□□□□ -0.06
VAPA-201ENST00000340541 PMS2P54278 862 aa14.69□□□□□ -0.06
VAPA-201ENST00000340541 SLC12A2P55011 1212 aa14.69□□□□□ -0.06
VAPA-201ENST00000340541 CSNK1G2P78368 415 aa14.69□□□□□ -0.06
VAPA-201ENST00000340541 CDKL1Q00532 357 aa14.69□□□□□ -0.06
VAPA-201ENST00000340541 SLC9A5Q14940 896 aa14.69□□□□□ -0.06
VAPA-201ENST00000340541 IGFBP7Q16270 282 aa14.69□□□□□ -0.06
VAPA-201ENST00000340541 MRPL14Q6P1L8 145 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms