RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 ZNF70Q9UC06 446 aaPredicted RBP12.53□□□□□ -0.4
USP47-202ENST00000339865 A6NCN8 305 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 CLDN5O00501 218 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 CMPK1P30085 196 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 PLA2G16P53816 162 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 GPR149Q86SP6 731 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 OR4D6Q8NGJ1 314 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 OR8D1Q8WZ84 308 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 TRMT61BQ9BVS5 477 aaKnown RBP12.53□□□□□ -0.4
USP47-202ENST00000339865 LRRC19Q9H756 370 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 ASF1BQ9NVP2 202 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 FRMPD4Q14CM0 1322 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 KHNYNO15037 678 aaKnown RBP12.53□□□□□ -0.4
USP47-202ENST00000339865 ADAMTS3O15072 1205 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 SNRPD2P62316 118 aaKnown RBP12.53□□□□□ -0.4
USP47-202ENST00000339865 HNRNPA0Q13151 305 aaKnown RBP12.53□□□□□ -0.4
USP47-202ENST00000339865 DCDC5Q6ZRR9 648 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 OR6C4Q8NGE1 309 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 TRIB2Q92519 343 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 SAT2Q96F10 170 aaPredicted RBP12.53□□□□□ -0.4
USP47-202ENST00000339865 ORAI3Q9BRQ5 295 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 DEFB129Q9H1M3 183 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 MYOZ2Q9NPC6 264 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 ENPP3O14638 875 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 SLC35G6P0C7Q6 338 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 SLC27A1Q6PCB7 646 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 PSRC1Q6PGN9 363 aaPredicted RBP12.53□□□□□ -0.4
USP47-202ENST00000339865 HID1Q8IV36 788 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 MFSD2AQ8NA29 543 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 SLAIN1Q8ND83 568 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 NCSTNQ92542 709 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 MTERF1Q99551 399 aaKnown RBP12.53□□□□□ -0.4
USP47-202ENST00000339865 PPIL3Q9H2H8 161 aaKnown RBP12.53□□□□□ -0.4
USP47-202ENST00000339865 KDM5CP41229 1560 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 NPHP4O75161 1426 aaPredicted RBP12.53□□□□□ -0.4
USP47-202ENST00000339865 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.53□□□□□ -0.4
USP47-202ENST00000339865 A0A1W2PQ67 120 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 H3BSA7 217 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 XRCC1P18887 633 aaPredicted RBP12.53□□□□□ -0.4
USP47-202ENST00000339865 MARCKSL1P49006 195 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 RPL7AP62424 266 aaKnown RBP12.53□□□□□ -0.4
USP47-202ENST00000339865 HTD2P86397 168 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 TBL1XR1Q9BZK7 514 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 ASAH2Q9NR71 780 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 PNO1Q9NRX1 252 aaKnown RBP12.53□□□□□ -0.4
USP47-202ENST00000339865 H0Y8G0 127 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 SCELO95171 688 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 OR8U9P0C7N5 309 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 MPIP34949 423 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 TMBIM6P55061 237 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 ERVK-8P63133 956 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 CDNFQ49AH0 187 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 PAOXQ6QHF9 649 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 ZNF584Q8IVC4 421 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 SAMD12Q8N8I0 201 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 AQP11Q8NBQ7 271 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 KCNN1Q92952 543 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 ZNF536O15090 1300 aa12.52□□□□□ -0.4
USP47-202ENST00000339865 IRS2Q9Y4H2 1338 aa12.52□□□□□ -0.4
USP47-202ENST00000339865 LRRN3E7EW58 273 aa12.52□□□□□ -0.4
USP47-202ENST00000339865 DLGAP1O14490 977 aa12.52□□□□□ -0.4
USP47-202ENST00000339865 GKN3PP0CG01 181 aa12.52□□□□□ -0.4
USP47-202ENST00000339865 RORAP35398 523 aa12.52□□□□□ -0.4
USP47-202ENST00000339865 UGT2B10P36537 528 aa12.52□□□□□ -0.4
USP47-202ENST00000339865 ADH7P40394 386 aa12.52□□□□□ -0.4
USP47-202ENST00000339865 KHKP50053 298 aa12.52□□□□□ -0.4
USP47-202ENST00000339865 DGKEP52429 567 aa12.52□□□□□ -0.4
USP47-202ENST00000339865 CLCQ05315 142 aa12.52□□□□□ -0.4
USP47-202ENST00000339865 PRKCZQ05513 592 aa12.52□□□□□ -0.4
USP47-202ENST00000339865 ZNF404Q494X3 552 aa12.52□□□□□ -0.4
USP47-202ENST00000339865 OR5M3Q8NGP4 307 aa12.52□□□□□ -0.4
USP47-202ENST00000339865 RPLP0P6Q8NHW5 317 aa12.52□□□□□ -0.4
USP47-202ENST00000339865 LRRN3Q9H3W5 708 aa12.52□□□□□ -0.4
USP47-202ENST00000339865 SCN1AP35498 2009 aa12.52□□□□□ -0.4
USP47-202ENST00000339865 METP08581 1390 aa12.52□□□□□ -0.4
USP47-202ENST00000339865 M0R2N6 131 aa12.52□□□□□ -0.4
USP47-202ENST00000339865 ICKQ9UPZ9 632 aa12.52□□□□□ -0.4
USP47-202ENST00000339865 USP42Q9H9J4 1324 aaKnown RBP12.52□□□□□ -0.4
USP47-202ENST00000339865 CABIN1Q9Y6J0 2220 aa12.52□□□□□ -0.41
USP47-202ENST00000339865 A0A0U1RQJ8 604 aa12.52□□□□□ -0.41
USP47-202ENST00000339865 BMP6P22004 513 aa12.52□□□□□ -0.41
USP47-202ENST00000339865 GRIA2P42262 883 aa12.52□□□□□ -0.41
USP47-202ENST00000339865 NCBP2P52298 156 aaKnown RBP eCLIP12.52□□□□□ -0.41
USP47-202ENST00000339865 MPP1Q00013 466 aa12.52□□□□□ -0.41
USP47-202ENST00000339865 PLEKHH3Q7Z736 793 aa12.52□□□□□ -0.41
USP47-202ENST00000339865 SYT4Q9H2B2 425 aa12.52□□□□□ -0.41
USP47-202ENST00000339865 TFB2MQ9H5Q4 396 aaKnown RBP12.52□□□□□ -0.41
USP47-202ENST00000339865 CRISP1P54107 249 aa12.52□□□□□ -0.41
USP47-202ENST00000339865 CPNE9Q8IYJ1 553 aa12.52□□□□□ -0.41
USP47-202ENST00000339865 VPS25Q9BRG1 176 aa12.52□□□□□ -0.41
USP47-202ENST00000339865 MRM3Q9HC36 420 aaKnown RBP12.52□□□□□ -0.41
USP47-202ENST00000339865 CLCA3PQ9Y6N3 262 aa12.52□□□□□ -0.41
USP47-202ENST00000339865 TTLL8A6PVC2 850 aa12.52□□□□□ -0.41
USP47-202ENST00000339865 ZNF670-ZNF695F2Z2N8 137 aa12.52□□□□□ -0.41
USP47-202ENST00000339865 EEF1E1O43324 174 aaKnown RBP12.52□□□□□ -0.41
USP47-202ENST00000339865 CNOT4O95628 575 aaKnown RBP12.52□□□□□ -0.41
USP47-202ENST00000339865 PPP1R8Q12972 351 aaKnown RBP12.52□□□□□ -0.41
USP47-202ENST00000339865 ABRAXAS2Q15018 415 aa12.52□□□□□ -0.41
USP47-202ENST00000339865 ZDHHC20Q5W0Z9 365 aa12.52□□□□□ -0.41
USP47-202ENST00000339865 Q8N402 240 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms