RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 PPP1R3BQ86XI6 285 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 GPR135Q8IZ08 494 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 TEX9Q8N6V9 391 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 BMPERQ8N8U9 685 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 OR4K1Q8NGD4 311 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 PPP4R1Q8TF05 950 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 NEIL2Q969S2 332 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 ZBTB9Q96C00 473 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 THAP11Q96EK4 314 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 PRR11Q96HE9 360 aaPredicted RBP11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 ZFYVE21Q9BQ24 234 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 AIF1LQ9BQI0 150 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 PELI2Q9HAT8 420 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 SSU72Q9NP77 194 aaKnown RBP11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 KCNK9Q9NPC2 374 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 THSD1Q9NS62 852 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 CUEDC1Q9NWM3 386 aaPredicted RBP11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 IRAK4Q9NWZ3 460 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 PCDHGA7Q9Y5G6 932 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 PCDHGA3Q9Y5H0 932 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 KNTC1P50748 2209 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 IGKV1-8A0A0C4DH67 115 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 A0A0J9YVX5 310 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 A0A1W2PNU3 283 aaPredicted RBP11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 A8MT66 165 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 TMEM150CB9EJG8 249 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 TXNDC9O14530 226 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 DLX3O60479 287 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 OR2B3O76000 313 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 DXOO77932 396 aaKnown RBP11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 SBK3P0C264 359 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 IMPDH1P20839 514 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 EEF1DP29692 281 aaKnown RBP11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 ETV5P41161 510 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 PRKAA2P54646 552 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 ITGA1P56199 1179 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 ERVPABLB-1P60509 514 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 NAA20P61599 178 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 RPS15AP62244 130 aaKnown RBP11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 IRF8Q02556 426 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 ASPHQ12797 758 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 LAPTM5Q13571 262 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 GTF2H2Q13888 395 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 XKR6Q5GH73 641 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 TNFAIP8L3Q5GJ75 292 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 PAGE2BQ5JRK9 111 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 CATSPEREQ5SY80 951 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 AGBL2Q5U5Z8 902 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 ATG9BQ674R7 924 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 GTF2H2CQ6P1K8 395 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 TLDC1Q6P9B6 456 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 ZYG11AQ6WRX3 759 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 SLCO4C1Q6ZQN7 724 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 KRT78Q8N1N4 520 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 SREK1Q8WXA9 508 aaKnown RBP11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 ATP6V1E2Q96A05 226 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 RERGQ96A58 199 aaPredicted RBP11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 ZNF501Q96CX3 271 aaPredicted RBP11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 ZNF578Q96N58 590 aaPredicted RBP11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 CTRCQ99895 268 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 SELENOSQ9BQE4 189 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 NLNQ9BYT8 704 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 SLC7A5P2Q9GIP4 190 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 EHD1Q9H4M9 534 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 PILRAQ9UKJ1 303 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 EMCNQ9ULC0 261 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 AP1M2Q9Y6Q5 423 aa11.42□□□□□ -0.58
SPTLC1-202ENST00000337841 SPTBN4Q9H254 2564 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 CFAP54Q96N23 3096 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 KCNE1BA0A087WTH5 132 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 TRBC2A0A5B9 178 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 E7EQ34 232 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 OR1F1O43749 312 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 BRINP1O60477 761 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 CTSVO60911 334 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 SIX3O95343 332 aaPredicted RBP11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 EIF2S1P05198 315 aaKnown RBP11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 HBQ1P09105 142 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 CD82P27701 267 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 SLC5A2P31639 672 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 CASP2P42575 452 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 GABRA4P48169 554 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 VSX2P58304 361 aaPredicted RBP11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 HERVK_113P63132 956 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 NFKB2Q00653 900 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 CYP4F3Q08477 520 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 CHIT1Q13231 466 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 RBBP5Q15291 538 aaKnown RBP11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 TBCCQ15814 346 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 FAM214AQ32MH5 1076 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 WASHC2DQ5SRD0 308 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 RNF44Q7L0R7 432 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 TMPRSS11BQ86T26 416 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 ARMC2Q8NEN0 867 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 OR1L3Q8NH93 324 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 TCP10LQ8TDR4 215 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 UBE2E3Q969T4 207 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 PTCD3Q96EY7 689 aaKnown RBP11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 FAM111AQ96PZ2 611 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms