RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 DSG2Q14126 1118 aa11.96□□□□□ -0.5
FN1-202ENST00000336916 USP30Q70CQ3 517 aa11.96□□□□□ -0.5
FN1-202ENST00000336916 GLIS3Q8NEA6 775 aa11.96□□□□□ -0.5
FN1-202ENST00000336916 OR52E4Q8NGH9 312 aa11.96□□□□□ -0.5
FN1-202ENST00000336916 ERLEC1Q96DZ1 483 aa11.96□□□□□ -0.5
FN1-202ENST00000336916 NELFAQ9H3P2 528 aa11.96□□□□□ -0.5
FN1-202ENST00000336916 TMEM248Q9NWD8 314 aa11.96□□□□□ -0.5
FN1-202ENST00000336916 FCF1Q9Y324 198 aaKnown RBP11.96□□□□□ -0.5
FN1-202ENST00000336916 NRXN3Q9Y4C0 1643 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 KDM4FA0A1W2PPD8 638 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 HOXB9P17482 250 aaPredicted RBP11.95□□□□□ -0.5
FN1-202ENST00000336916 MAT2AP31153 395 aaKnown RBP11.95□□□□□ -0.5
FN1-202ENST00000336916 RAB43Q86YS6 212 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 GRPEL2Q8TAA5 225 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 CPT1BQ92523 772 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 DAZLQ92904 295 aaKnown RBP11.95□□□□□ -0.5
FN1-202ENST00000336916 KCNH6Q9H252 994 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 DENND2DQ9H6A0 471 aaPredicted RBP11.95□□□□□ -0.5
FN1-202ENST00000336916 DKKL1Q9UK85 242 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 A0A1B0GVC2 190 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 A0A1W2PRB8 838 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 CXCR6O00574 342 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 HOXD8P13378 290 aaPredicted RBP11.95□□□□□ -0.5
FN1-202ENST00000336916 NMBRP28336 390 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 LIPJQ5W064 366 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 MOB2Q70IA6 237 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 ZNF227Q86WZ6 799 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 FAM174AQ8TBP5 190 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 LENG1Q96BZ8 264 aaPredicted RBP11.95□□□□□ -0.5
FN1-202ENST00000336916 SLC16A5O15375 505 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 AHCYP23526 432 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 ABCG1P45844 678 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 PLA2G16P53816 162 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 TTMPQ5BVD1 217 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 ARSJQ5FYB0 599 aaPredicted RBP11.95□□□□□ -0.5
FN1-202ENST00000336916 PLXDC1Q8IUK5 500 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 TSEN2Q8NCE0 465 aaKnown RBP11.95□□□□□ -0.5
FN1-202ENST00000336916 INSL5Q9Y5Q6 135 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 SLC6A9P48067 706 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 MZT1Q08AG7 82 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 UNC5DQ6UXZ4 953 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 TMEM126BQ8IUX1 230 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 JOSD2Q8TAC2 188 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 ALG3Q92685 438 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 TNFRSF25Q93038 417 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 DERL2Q9GZP9 239 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 DTLQ9NZJ0 730 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 UNGP13051 313 aaPredicted RBP11.95□□□□□ -0.5
FN1-202ENST00000336916 AQP1P29972 269 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 ACSL1P33121 698 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 CLCNKAP51800 687 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 FOXK1P85037 733 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 TARDBPQ13148 414 aaKnown RBP eCLIP11.95□□□□□ -0.5
FN1-202ENST00000336916 PUM1Q14671 1186 aaKnown RBP eCLIP11.95□□□□□ -0.5
FN1-202ENST00000336916 OCLNQ16625 522 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 YJEFN3A6XGL0 299 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 AHCYL1O43865 530 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 F8A1P23610 371 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 ARPC4P59998 168 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 DSTNP60981 165 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 CRB2Q5IJ48 1285 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 BORAQ6PGQ7 559 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 SLC5A11Q8WWX8 675 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 MTERF1Q99551 399 aaKnown RBP11.95□□□□□ -0.5
FN1-202ENST00000336916 NAA11Q9BSU3 229 aaPredicted RBP11.95□□□□□ -0.5
FN1-202ENST00000336916 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.95□□□□□ -0.5
FN1-202ENST00000336916 UTS2RQ9UKP6 389 aa11.95□□□□□ -0.5
FN1-202ENST00000336916 HYKKA2RU49 373 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 ENTPD6O75354 484 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 F2P00734 622 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 RPLP0P05388 317 aaKnown RBP11.94□□□□□ -0.5
FN1-202ENST00000336916 PGRP06401 933 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 SLBPQ14493 270 aaKnown RBP eCLIP11.94□□□□□ -0.5
FN1-202ENST00000336916 SLITRK4Q8IW52 837 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 PACRGLQ8N7B6 248 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 PROKR2Q8NFJ6 384 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 COQ8BQ96D53 544 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 GORASP1Q9BQQ3 440 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 WDR6Q9NNW5 1121 aaKnown RBP11.94□□□□□ -0.5
FN1-202ENST00000336916 ACP6Q9NPH0 428 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 DNAJB9Q9UBS3 223 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 RIPK3Q9Y572 518 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 ACOT7O00154 380 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 DLDP09622 509 aaKnown RBP11.94□□□□□ -0.5
FN1-202ENST00000336916 WASP42768 502 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 HNRNPKP61978 463 aaKnown RBP eCLIP11.94□□□□□ -0.51e-9■■■□□ 18.8
FN1-202ENST00000336916 SLC10A7Q0GE19 358 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 PRPF38BQ5VTL8 546 aaKnown RBP11.94□□□□□ -0.5
FN1-202ENST00000336916 AADACL2Q6P093 401 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 POMZP3Q6PJE2 187 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 ALYREFQ86V81 257 aaKnown RBP11.94□□□□□ -0.5
FN1-202ENST00000336916 NELL2Q99435 816 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 ORAI3Q9BRQ5 295 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 EHD1Q9H4M9 534 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 OSER1Q9NX31 292 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 LIPT1Q9Y234 373 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 GSTM2P28161 218 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 PCDH1Q08174 1060 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 INCA1Q0VD86 236 aa11.94□□□□□ -0.5
FN1-202ENST00000336916 GPR17Q13304 367 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms