RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 EMP2P54851 167 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 FOXL2P58012 376 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 AP2B1P63010 937 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 CUL1Q13616 776 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 DSG2Q14126 1118 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 FAM53BQ14153 422 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 ELOAQ14241 798 aaKnown RBP16.9■□□□□ 0.3
CMTM1-204ENST00000336328 RNASEH2BQ5TBB1 312 aaKnown RBP16.9■□□□□ 0.3
CMTM1-204ENST00000336328 ZNF549Q6P9A3 640 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 IGFL2Q6UWQ7 119 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 SHISA6Q6ZSJ9 500 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 KIAA0408Q6ZU52 694 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 NDUFAF7Q7L592 441 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 ADCK2Q7Z695 626 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 DNAJB14Q8TBM8 379 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 PPP4R1Q8TF05 950 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 THAP11Q96EK4 314 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 RUNDC3BQ96NL0 473 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 SLC30A3Q99726 388 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 WDR77Q9BQA1 342 aaPredicted RBP16.9■□□□□ 0.3
CMTM1-204ENST00000336328 AARSD1Q9BTE6 412 aaKnown RBP16.9■□□□□ 0.3
CMTM1-204ENST00000336328 FAM129AQ9BZQ8 928 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 MKKSQ9NPJ1 570 aaPredicted RBP16.9■□□□□ 0.3
CMTM1-204ENST00000336328 IARS2Q9NSE4 1012 aaKnown RBP16.9■□□□□ 0.3
CMTM1-204ENST00000336328 TRPC4Q9UBN4 977 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 ASIC3Q9UHC3 531 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 SNX12Q9UMY4 172 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 RUVBL1Q9Y265 456 aaKnown RBP16.9■□□□□ 0.3
CMTM1-204ENST00000336328 NUP210LQ5VU65 1888 aa16.9■□□□□ 0.3
CMTM1-204ENST00000336328 PCSK5Q92824 1860 aa16.89■□□□□ 0.29
CMTM1-204ENST00000336328 PABPN1LA6NDY0 278 aaKnown RBP16.89■□□□□ 0.29
CMTM1-204ENST00000336328 SLC16A5O15375 505 aa16.89■□□□□ 0.29
CMTM1-204ENST00000336328 HIST1H2AGP0C0S8 130 aaPredicted RBP16.89■□□□□ 0.29
CMTM1-204ENST00000336328 ICAM2P13598 275 aa16.89■□□□□ 0.29
CMTM1-204ENST00000336328 HIST1H2ADP20671 130 aa16.89■□□□□ 0.29
CMTM1-204ENST00000336328 CCND1P24385 295 aa16.89■□□□□ 0.29
CMTM1-204ENST00000336328 AVPR1BP47901 424 aa16.89■□□□□ 0.29
CMTM1-204ENST00000336328 YBX1P67809 324 aaKnown RBP16.89■□□□□ 0.29
CMTM1-204ENST00000336328 KCTD19Q17RG1 926 aaPredicted RBP16.89■□□□□ 0.29
CMTM1-204ENST00000336328 SPANXN3Q5MJ09 141 aa16.89■□□□□ 0.29
CMTM1-204ENST00000336328 ATG9BQ674R7 924 aa16.89■□□□□ 0.29
CMTM1-204ENST00000336328 ISLR2Q6UXK2 745 aa16.89■□□□□ 0.29
CMTM1-204ENST00000336328 KBTBD2Q8IY47 623 aa16.89■□□□□ 0.29
CMTM1-204ENST00000336328 C2CD4AQ8NCU7 369 aaPredicted RBP16.89■□□□□ 0.29
CMTM1-204ENST00000336328 GIMAP7Q8NHV1 300 aa16.89■□□□□ 0.29
CMTM1-204ENST00000336328 CD200R1Q8TD46 325 aa16.89■□□□□ 0.29
CMTM1-204ENST00000336328 SSC4DQ8WTU2 575 aa16.89■□□□□ 0.29
CMTM1-204ENST00000336328 MMABQ96EY8 250 aaPredicted RBP16.89■□□□□ 0.29
CMTM1-204ENST00000336328 THOC3Q96J01 351 aaKnown RBP16.89■□□□□ 0.29
CMTM1-204ENST00000336328 HIST1H2AHQ96KK5 128 aa16.89■□□□□ 0.29
CMTM1-204ENST00000336328 HIST1H2AJQ99878 128 aa16.89■□□□□ 0.29
CMTM1-204ENST00000336328 H2AFJQ9BTM1 129 aa16.89■□□□□ 0.29
CMTM1-204ENST00000336328 TGIF2Q9GZN2 237 aa16.89■□□□□ 0.29
CMTM1-204ENST00000336328 DRC3Q9H069 523 aa16.89■□□□□ 0.29
CMTM1-204ENST00000336328 CCDC177Q9NQR7 707 aaPredicted RBP16.89■□□□□ 0.29
CMTM1-204ENST00000336328 ABCF3Q9NUQ8 709 aa16.89■□□□□ 0.29
CMTM1-204ENST00000336328 ASF1BQ9NVP2 202 aa16.89■□□□□ 0.29
CMTM1-204ENST00000336328 PCYOX1Q9UHG3 505 aa16.89■□□□□ 0.29
CMTM1-204ENST00000336328 MED16Q9Y2X0 877 aa16.89■□□□□ 0.29
CMTM1-204ENST00000336328 ICE1Q9Y2F5 2266 aa16.88■□□□□ 0.29
CMTM1-204ENST00000336328 KCNE1BA0A087WTH5 132 aa16.88■□□□□ 0.29
CMTM1-204ENST00000336328 IGKV1-8A0A0C4DH67 115 aa16.88■□□□□ 0.29
CMTM1-204ENST00000336328 H7BY64 318 aa16.88■□□□□ 0.29
CMTM1-204ENST00000336328 DNALI1O14645 258 aaPredicted RBP16.88■□□□□ 0.29
CMTM1-204ENST00000336328 HEXBP07686 556 aa16.88■□□□□ 0.29
CMTM1-204ENST00000336328 SLC26A3P40879 764 aa16.88■□□□□ 0.29
CMTM1-204ENST00000336328 RPS15AP62244 130 aaKnown RBP16.88■□□□□ 0.29
CMTM1-204ENST00000336328 CRYMQ14894 314 aa16.88■□□□□ 0.29
CMTM1-204ENST00000336328 TLR1Q15399 786 aa16.88■□□□□ 0.29
CMTM1-204ENST00000336328 EIF2S3LQ2VIR3 472 aaKnown RBP16.88■□□□□ 0.29
CMTM1-204ENST00000336328 VWA2Q5GFL6 755 aa16.88■□□□□ 0.29
CMTM1-204ENST00000336328 SYDE1Q6ZW31 735 aaPredicted RBP16.88■□□□□ 0.29
CMTM1-204ENST00000336328 CPNE9Q8IYJ1 553 aa16.88■□□□□ 0.29
CMTM1-204ENST00000336328 PDIK1LQ8N165 341 aa16.88■□□□□ 0.29
CMTM1-204ENST00000336328 MYO1HQ8N1T3 1032 aa16.88■□□□□ 0.29
CMTM1-204ENST00000336328 PPFIBP2Q8ND30 876 aa16.88■□□□□ 0.29
CMTM1-204ENST00000336328 PRR7Q8TB68 274 aa16.88■□□□□ 0.29
CMTM1-204ENST00000336328 SLCO2A1Q92959 643 aa16.88■□□□□ 0.29
CMTM1-204ENST00000336328 C10orf90Q96M02 699 aa16.88■□□□□ 0.29
CMTM1-204ENST00000336328 PRAP1Q96NZ9 151 aa16.88■□□□□ 0.29
CMTM1-204ENST00000336328 TRIM54Q9BYV2 358 aa16.88■□□□□ 0.29
CMTM1-204ENST00000336328 PARVBQ9HBI1 364 aa16.88■□□□□ 0.29
CMTM1-204ENST00000336328 COL12A1Q99715 3063 aa16.87■□□□□ 0.29
CMTM1-204ENST00000336328 NSG1A0A0A6YYJ2 146 aa16.87■□□□□ 0.29
CMTM1-204ENST00000336328 IDSB3KWA1 339 aa16.87■□□□□ 0.29
CMTM1-204ENST00000336328 MASP2O00187 686 aa16.87■□□□□ 0.29
CMTM1-204ENST00000336328 MED26O95402 600 aa16.87■□□□□ 0.29
CMTM1-204ENST00000336328 CBX6O95503 412 aa16.87■□□□□ 0.29
CMTM1-204ENST00000336328 MYBL2P10244 700 aa16.87■□□□□ 0.29
CMTM1-204ENST00000336328 GRK3P35626 688 aa16.87■□□□□ 0.29
CMTM1-204ENST00000336328 MPP1Q00013 466 aa16.87■□□□□ 0.29
CMTM1-204ENST00000336328 SP140Q13342 867 aa16.87■□□□□ 0.29
CMTM1-204ENST00000336328 HKDC1Q2TB90 917 aa16.87■□□□□ 0.29
CMTM1-204ENST00000336328 PRR30Q53SZ7 412 aaPredicted RBP16.87■□□□□ 0.29
CMTM1-204ENST00000336328 B3GNTL1Q67FW5 361 aaPredicted RBP16.87■□□□□ 0.29
CMTM1-204ENST00000336328 GALNT7Q86SF2 657 aa16.87■□□□□ 0.29
CMTM1-204ENST00000336328 TMEM151BQ8IW70 566 aa16.87■□□□□ 0.29
CMTM1-204ENST00000336328 LRRC56Q8IYG6 542 aaPredicted RBP16.87■□□□□ 0.29
CMTM1-204ENST00000336328 PRSS58Q8IYP2 241 aa16.87■□□□□ 0.29
CMTM1-204ENST00000336328 EEF1AKMT1Q8WVE0 214 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms