RNA–Protein interactions for RNA: ENST00000333722.9

C12orf56-201, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best) BASIC

Gene C12orf56, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-201ENST00000333722 CLDND1Q9NY35 253 aa12.66□□□□□ -0.38
C12orf56-201ENST00000333722 SCN3BQ9NY72 215 aa12.66□□□□□ -0.38
C12orf56-201ENST00000333722 FBXO10Q9UK96 956 aa12.66□□□□□ -0.38
C12orf56-201ENST00000333722 NDRG2Q9UN36 371 aaKnown RBP12.66□□□□□ -0.38
C12orf56-201ENST00000333722 QSOX1O00391 747 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 MITFO75030 526 aaPredicted RBP12.65□□□□□ -0.38
C12orf56-201ENST00000333722 KAT7O95251 611 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 MATN4O95460 622 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 RAB8AP61006 207 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 ZNF542PQ5EBM4 170 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 TMEM240Q5SV17 173 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 TANGO2Q6ICL3 276 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 KRT78Q8N1N4 520 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 TMEM102Q8N9M5 508 aaPredicted RBP12.65□□□□□ -0.38
C12orf56-201ENST00000333722 FRS2Q8WU20 508 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 TRMT61BQ9BVS5 477 aaKnown RBP12.65□□□□□ -0.38
C12orf56-201ENST00000333722 TMEM121BQ9BXQ6 578 aaPredicted RBP12.65□□□□□ -0.38
C12orf56-201ENST00000333722 FANCEQ9HB96 536 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 C3orf18Q9UK00 162 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 MYO10Q9HD67 2058 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 CROCCQ5TZA2 2017 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 GSAPA4D1B5 854 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 TTC36A6NLP5 189 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 H7C0S8 307 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 M0R3G1 203 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 SGTAO43765 313 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 CDH2P19022 906 aaPredicted RBP12.65□□□□□ -0.38
C12orf56-201ENST00000333722 PRPS1L1P21108 318 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 IGFBP5P24593 272 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 PSMB5P28074 263 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 PBX2P40425 430 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 CLK1P49759 484 aaKnown RBP12.65□□□□□ -0.38
C12orf56-201ENST00000333722 HMBOX1Q6NT76 420 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 DEF8Q6ZN54 512 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 GLB1L3Q8NCI6 653 aaPredicted RBP12.65□□□□□ -0.38
C12orf56-201ENST00000333722 PDPRQ8NCN5 879 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 RELTQ969Z4 430 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 REPS1Q96D71 796 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 CHFRQ96EP1 664 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 CEP295NLQ96MC4 621 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 NLNQ9BYT8 704 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 TOR3AQ9H497 397 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.65□□□□□ -0.38
C12orf56-201ENST00000333722 SIP14410 1827 aa12.65□□□□□ -0.38
C12orf56-201ENST00000333722 OR52A4PA6NMU1 304 aa12.65□□□□□ -0.39
C12orf56-201ENST00000333722 XPNPEP2O43895 674 aa12.65□□□□□ -0.39
C12orf56-201ENST00000333722 FGF19O95750 216 aa12.65□□□□□ -0.39
C12orf56-201ENST00000333722 CTSLP07711 333 aa12.65□□□□□ -0.39
C12orf56-201ENST00000333722 NUDT7P0C024 238 aa12.65□□□□□ -0.39
C12orf56-201ENST00000333722 ADRB3P13945 408 aa12.65□□□□□ -0.39
C12orf56-201ENST00000333722 CAPGP40121 348 aa12.65□□□□□ -0.39
C12orf56-201ENST00000333722 CDH12P55289 794 aa12.65□□□□□ -0.39
C12orf56-201ENST00000333722 ALG1LQ6GMV1 187 aa12.65□□□□□ -0.39
C12orf56-201ENST00000333722 OGFOD2Q6N063 350 aa12.65□□□□□ -0.39
C12orf56-201ENST00000333722 KCTD8Q6ZWB6 473 aa12.65□□□□□ -0.39
C12orf56-201ENST00000333722 ERN2Q76MJ5 926 aaKnown RBP12.65□□□□□ -0.39
C12orf56-201ENST00000333722 ZNF540Q8NDQ6 660 aa12.65□□□□□ -0.39
C12orf56-201ENST00000333722 SMARCD2Q92925 531 aa12.65□□□□□ -0.39
C12orf56-201ENST00000333722 SLCO4A1Q96BD0 722 aa12.65□□□□□ -0.39
C12orf56-201ENST00000333722 F2RL3Q96RI0 385 aa12.65□□□□□ -0.39
C12orf56-201ENST00000333722 RC3H2Q9HBD1 1191 aaKnown RBP12.65□□□□□ -0.39
C12orf56-201ENST00000333722 KRT84Q9NSB2 600 aa12.65□□□□□ -0.39
C12orf56-201ENST00000333722 AHSPQ9NZD4 102 aa12.65□□□□□ -0.39
C12orf56-201ENST00000333722 ATXN10Q9UBB4 475 aa12.65□□□□□ -0.39
C12orf56-201ENST00000333722 RSL24D1Q9UHA3 163 aaKnown RBP12.65□□□□□ -0.39
C12orf56-201ENST00000333722 M0QX08 132 aa12.64□□□□□ -0.39
C12orf56-201ENST00000333722 RASGRP1O95267 797 aa12.64□□□□□ -0.39
C12orf56-201ENST00000333722 RNF144AP50876 292 aaPredicted RBP12.64□□□□□ -0.39
C12orf56-201ENST00000333722 C5orf22Q49AR2 442 aa12.64□□□□□ -0.39
C12orf56-201ENST00000333722 PRAMEF14Q5SWL7 426 aa12.64□□□□□ -0.39
C12orf56-201ENST00000333722 PRAMEF13Q5VWM6 474 aa12.64□□□□□ -0.39
C12orf56-201ENST00000333722 UGT2A3Q6UWM9 527 aa12.64□□□□□ -0.39
C12orf56-201ENST00000333722 TRAM1L1Q8N609 369 aa12.64□□□□□ -0.39
C12orf56-201ENST00000333722 OR7G3Q8NG95 312 aa12.64□□□□□ -0.39
C12orf56-201ENST00000333722 ZCCHC10Q8TBK6 192 aa12.64□□□□□ -0.39
C12orf56-201ENST00000333722 GTF2H4Q92759 462 aa12.64□□□□□ -0.39
C12orf56-201ENST00000333722 SH3GL3Q99963 347 aa12.64□□□□□ -0.39
C12orf56-201ENST00000333722 WDR26Q9H7D7 661 aa12.64□□□□□ -0.39
C12orf56-201ENST00000333722 CARS2Q9HA77 564 aaKnown RBP12.64□□□□□ -0.39
C12orf56-201ENST00000333722 CXorf21Q9HAI6 301 aa12.64□□□□□ -0.39
C12orf56-201ENST00000333722 NDUFA13Q9P0J0 144 aa12.64□□□□□ -0.39
C12orf56-201ENST00000333722 MSRAQ9UJ68 235 aa12.64□□□□□ -0.39
C12orf56-201ENST00000333722 CA5BQ9Y2D0 317 aa12.64□□□□□ -0.39
C12orf56-201ENST00000333722 SMIM31A0A1B0GVY4 71 aa12.64□□□□□ -0.39
C12orf56-201ENST00000333722 TOR1BO14657 336 aa12.64□□□□□ -0.39
C12orf56-201ENST00000333722 PENKP01210 267 aaPredicted RBP12.64□□□□□ -0.39
C12orf56-201ENST00000333722 CHRM5P08912 532 aaPredicted RBP12.64□□□□□ -0.39
C12orf56-201ENST00000333722 CBSLP0DN79 551 aa12.64□□□□□ -0.39
C12orf56-201ENST00000333722 FUT4P22083 530 aa12.64□□□□□ -0.39
C12orf56-201ENST00000333722 RPS3P23396 243 aaKnown RBP eCLIP12.64□□□□□ -0.39
C12orf56-201ENST00000333722 CBSP35520 551 aa12.64□□□□□ -0.39
C12orf56-201ENST00000333722 RANBP1P43487 201 aa12.64□□□□□ -0.39
C12orf56-201ENST00000333722 DYNC1I2Q13409 638 aaKnown RBP12.64□□□□□ -0.39
C12orf56-201ENST00000333722 DAG1Q14118 895 aa12.64□□□□□ -0.39
C12orf56-201ENST00000333722 ELAVL3Q14576 367 aaKnown RBP12.64□□□□□ -0.39
C12orf56-201ENST00000333722 C9orf50Q5SZB4 431 aa12.64□□□□□ -0.39
C12orf56-201ENST00000333722 TTC23Q5W5X9 447 aa12.64□□□□□ -0.39
C12orf56-201ENST00000333722 ZFP28Q8NHY6 868 aa12.64□□□□□ -0.39
C12orf56-201ENST00000333722 ZNF689Q96CS4 500 aaPredicted RBP12.64□□□□□ -0.39
C12orf56-201ENST00000333722 TRPS1Q9UHF7 1281 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms