RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 WBP4O75554 376 aaKnown RBP11.94□□□□□ -0.5
VPS33B-201ENST00000333371 FABP3P05413 133 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 URODP06132 367 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 AMD1P17707 334 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 LHCGRP22888 699 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 AOAHP28039 575 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 AP1S1P61966 158 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 SFSWAPQ12872 951 aaKnown RBP11.94□□□□□ -0.5
VPS33B-201ENST00000333371 MAD2L1BPQ15013 274 aaPredicted RBP11.94□□□□□ -0.5
VPS33B-201ENST00000333371 VMACQ2NL98 169 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 ZC3H12BQ5HYM0 836 aaKnown RBP11.94□□□□□ -0.5
VPS33B-201ENST00000333371 GPR153Q6NV75 609 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 PAGE2Q7Z2X7 111 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 TMCO2Q7Z6W1 182 aaPredicted RBP11.94□□□□□ -0.5
VPS33B-201ENST00000333371 AUTS2Q8WXX7 1259 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 MYLIPQ8WY64 445 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 SLC29A3Q9BZD2 475 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 PRM3Q9NNZ6 103 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 KRT84Q9NSB2 600 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 TMEM39AQ9NV64 488 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 KIAA1522Q9P206 1035 aaPredicted RBP11.94□□□□□ -0.5
VPS33B-201ENST00000333371 SAMD4AQ9UPU9 718 aaKnown RBP11.94□□□□□ -0.5
VPS33B-201ENST00000333371 TRIM43BA6NCK2 446 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 EVPLLA8MZ36 301 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 ABLIM3O94929 683 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 NTRK1P04629 796 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 CD22P20273 847 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 C21orf33P30042 268 aaPredicted RBP11.93□□□□□ -0.5
VPS33B-201ENST00000333371 CD70P32970 193 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 KDELR2P33947 212 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 CRYBA2P53672 197 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 WNT3P56703 355 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 RAB15P59190 212 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 ACOX1Q15067 660 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 SMU1Q2TAY7 513 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 RFX4Q33E94 735 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 ZNF648Q5T619 568 aaPredicted RBP11.93□□□□□ -0.5
VPS33B-201ENST00000333371 SYT12Q8IV01 421 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 APH1BQ8WW43 257 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 DNASE1L2Q92874 299 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 VOPP1Q96AW1 172 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 KCNC2Q96PR1 638 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 RDH14Q9HBH5 336 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 ZBTB20Q9HC78 741 aaPredicted RBP11.93□□□□□ -0.5
VPS33B-201ENST00000333371 TM9SF3Q9HD45 589 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 KCTD5Q9NXV2 234 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 SLCO3A1Q9UIG8 710 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 TMPRSS11EQ9UL52 423 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 TPRKBQ9Y3C4 175 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 PCDHGB1Q9Y5G3 927 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 PCM1Q15154 2024 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 M0R129 80 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 SLC22A1O15245 554 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 RGS10O43665 173 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 GREM1O60565 184 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 EFEMP2O95967 443 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 LAMP1P11279 417 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 CD36P16671 472 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 JUNDP17535 347 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 EPHB3P54753 998 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 RPP38P78345 283 aaKnown RBP11.93□□□□□ -0.5
VPS33B-201ENST00000333371 CHIT1Q13231 466 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 IL18R1Q13478 541 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 TTLL9Q3SXZ7 439 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 CYP27C1Q4G0S4 372 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 SOWAHCQ53LP3 525 aaPredicted RBP11.93□□□□□ -0.5
VPS33B-201ENST00000333371 NCCRP1Q6ZVX7 275 aaPredicted RBP11.93□□□□□ -0.5
VPS33B-201ENST00000333371 DCAF4L2Q8NA75 395 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 SETD9Q8NE22 299 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 OR6Q1Q8NGQ2 317 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 PROX1Q92786 737 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 NELL1Q92832 810 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 SH3KBP1Q96B97 665 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 ASIC4Q96FT7 647 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 MIR1-1HGQ9H1L0 117 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 RNF167Q9H6Y7 350 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 ZNF334Q9HCZ1 680 aaPredicted RBP11.93□□□□□ -0.5
VPS33B-201ENST00000333371 THUMPD1Q9NXG2 353 aaKnown RBP11.93□□□□□ -0.5
VPS33B-201ENST00000333371 SAGE1Q9NXZ1 904 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 SCN3BQ9NY72 215 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 NDRG4Q9ULP0 352 aaKnown RBP11.93□□□□□ -0.5
VPS33B-201ENST00000333371 SNX6Q9UNH7 406 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 USP34Q70CQ2 3546 aa11.93□□□□□ -0.5
VPS33B-201ENST00000333371 TTC34A8MYJ7 566 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 SCN2BO60939 215 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 OPN1SWP03999 348 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 PRPS2P11908 318 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 COX7A2P14406 83 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 ACPPP15309 386 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 MAGP20916 626 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 DNAJA1P31689 397 aaKnown RBP11.92□□□□□ -0.5
VPS33B-201ENST00000333371 TGFBR2P37173 567 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 LIPAP38571 399 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 NSG1P42857 185 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 ARHGDIAP52565 204 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 PTSQ03393 145 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 SLC13A2Q13183 592 aa11.92□□□□□ -0.5
VPS33B-201ENST00000333371 SYT6Q5T7P8 510 aaPredicted RBP11.92□□□□□ -0.5
VPS33B-201ENST00000333371 HJURPQ8NCD3 748 aaPredicted RBP11.92□□□□□ -0.5
VPS33B-201ENST00000333371 PSMA8Q8TAA3 256 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms