RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 RPS6KA6Q9UK32 745 aa23.62■■□□□ 1.37
SOX1-201ENST00000330949 OTOFQ9HC10 1997 aa23.62■■□□□ 1.37
SOX1-201ENST00000330949 C9P02748 559 aa23.61■■□□□ 1.37
SOX1-201ENST00000330949 RENBPP51606 427 aa23.61■■□□□ 1.37
SOX1-201ENST00000330949 NUDT6P53370 316 aa23.61■■□□□ 1.37
SOX1-201ENST00000330949 VLDLRP98155 873 aa23.61■■□□□ 1.37
SOX1-201ENST00000330949 TEKQ02763 1124 aa23.61■■□□□ 1.37
SOX1-201ENST00000330949 PAMR1Q6UXH9 720 aa23.61■■□□□ 1.37
SOX1-201ENST00000330949 GPRIN1Q7Z2K8 1008 aa23.61■■□□□ 1.37
SOX1-201ENST00000330949 OR4L1Q8NH43 312 aa23.61■■□□□ 1.37
SOX1-201ENST00000330949 ZSCAN5AQ9BUG6 496 aa23.61■■□□□ 1.37
SOX1-201ENST00000330949 HDHD5Q9BXW7 423 aa23.61■■□□□ 1.37
SOX1-201ENST00000330949 CLMPQ9H6B4 373 aa23.61■■□□□ 1.37
SOX1-201ENST00000330949 PDCD11Q14690 1871 aaKnown RBP23.61■■□□□ 1.37
SOX1-201ENST00000330949 GBF1Q92538 1859 aa23.61■■□□□ 1.37
SOX1-201ENST00000330949 SEC14L5O43304 696 aa23.61■■□□□ 1.37
SOX1-201ENST00000330949 RPP40O75818 363 aaKnown RBP23.61■■□□□ 1.37
SOX1-201ENST00000330949 SMPD1P17405 629 aa23.61■■□□□ 1.37
SOX1-201ENST00000330949 HOXC13P31276 330 aa23.61■■□□□ 1.37
SOX1-201ENST00000330949 CTAG1AP78358 180 aa23.61■■□□□ 1.37
SOX1-201ENST00000330949 ABRAXAS2Q15018 415 aa23.61■■□□□ 1.37
SOX1-201ENST00000330949 SETMARQ53H47 684 aaPredicted RBP23.61■■□□□ 1.37
SOX1-201ENST00000330949 CCDC149Q6ZUS6 474 aa23.61■■□□□ 1.37
SOX1-201ENST00000330949 FAM181AQ8N9Y4 354 aa23.61■■□□□ 1.37
SOX1-201ENST00000330949 OR6J1Q8NGC5 347 aa23.61■■□□□ 1.37
SOX1-201ENST00000330949 MROH8Q9H579 483 aa23.61■■□□□ 1.37
SOX1-201ENST00000330949 RETREG1Q9H6L5 497 aa23.61■■□□□ 1.37
SOX1-201ENST00000330949 SLC6A13Q9NSD5 602 aa23.61■■□□□ 1.37
SOX1-201ENST00000330949 NDFIP2Q9NV92 336 aa23.61■■□□□ 1.37
SOX1-201ENST00000330949 TRIM77I1YAP6 450 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 PLD2O14939 933 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 ALAS2P22557 587 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 ITGA1P56199 1179 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 MED22Q15528 200 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 GPR19Q15760 415 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 PLET1Q6UQ28 207 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 ZNF557Q8N988 423 aaPredicted RBP23.6■■□□□ 1.37
SOX1-201ENST00000330949 DNAJA4Q8WW22 397 aaPredicted RBP23.6■■□□□ 1.37
SOX1-201ENST00000330949 KCNC2Q96PR1 638 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 CMAHPQ9Y471 501 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 TNPO3Q9Y5L0 923 aaKnown RBP23.6■■□□□ 1.37
SOX1-201ENST00000330949 LINC00862A6NCI5 91 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 CSF2P04141 144 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 MAXP61244 160 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 TATDN3Q17R31 274 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 PDZK1Q5T2W1 519 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 LRIF1Q5T3J3 769 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 WSCD1Q658N2 575 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 FAM131AQ6UXB0 335 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 ZZZ3Q8IYH5 903 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 CHCHD4Q8N4Q1 142 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 KCNH6Q9H252 994 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 MAPRE3Q9UPY8 281 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 RPS19P39019 145 aaKnown RBP23.6■■□□□ 1.37
SOX1-201ENST00000330949 KIR2DL3P43628 341 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 KCNQ1P51787 676 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 RAB41Q5JT25 222 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 NOTUMQ6P988 496 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 TOP6BLQ8N6T0 577 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 GDPD1Q8N9F7 314 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 BARHL1Q9BZE3 327 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 MED16Q9Y2X0 877 aa23.6■■□□□ 1.37
SOX1-201ENST00000330949 MEIS3P2A8K0S8 358 aa23.59■■□□□ 1.37
SOX1-201ENST00000330949 RGS14O43566 566 aa23.59■■□□□ 1.37
SOX1-201ENST00000330949 SCO1O75880 301 aa23.59■■□□□ 1.37
SOX1-201ENST00000330949 SEMG1P04279 462 aa23.59■■□□□ 1.37
SOX1-201ENST00000330949 HOXD10P28358 340 aa23.59■■□□□ 1.37
SOX1-201ENST00000330949 PXNP49023 591 aaPredicted RBP23.59■■□□□ 1.37
SOX1-201ENST00000330949 HK3P52790 923 aa23.59■■□□□ 1.37
SOX1-201ENST00000330949 ZBTB37Q5TC79 503 aa23.59■■□□□ 1.37
SOX1-201ENST00000330949 LAMTOR1Q6IAA8 161 aa23.59■■□□□ 1.37
SOX1-201ENST00000330949 GPR21Q99679 349 aa23.59■■□□□ 1.37
SOX1-201ENST00000330949 CNPPD1Q9BV87 410 aa23.59■■□□□ 1.37
SOX1-201ENST00000330949 RAD18Q9NS91 495 aa23.59■■□□□ 1.37
SOX1-201ENST00000330949 GPX5O75715 221 aa23.59■■□□□ 1.37
SOX1-201ENST00000330949 EPN2O95208 641 aa23.59■■□□□ 1.37
SOX1-201ENST00000330949 GLYR1Q49A26 553 aaPredicted RBP23.59■■□□□ 1.37
SOX1-201ENST00000330949 LRRC66Q68CR7 880 aa23.59■■□□□ 1.37
SOX1-201ENST00000330949 ALKAL1Q6UXT8 129 aa23.59■■□□□ 1.37
SOX1-201ENST00000330949 Q6ZPB1 254 aaPredicted RBP23.59■■□□□ 1.37
SOX1-201ENST00000330949 LIX1Q8N485 282 aa23.59■■□□□ 1.37
SOX1-201ENST00000330949 ARRDC4Q8NCT1 418 aa23.59■■□□□ 1.37
SOX1-201ENST00000330949 DENND6BQ8NEG7 585 aa23.59■■□□□ 1.37
SOX1-201ENST00000330949 OR4F6Q8NGB9 312 aa23.59■■□□□ 1.37
SOX1-201ENST00000330949 NECTIN4Q96NY8 510 aa23.59■■□□□ 1.37
SOX1-201ENST00000330949 EXOSC4Q9NPD3 245 aaKnown RBP23.59■■□□□ 1.37
SOX1-201ENST00000330949 TMEM39AQ9NV64 488 aa23.59■■□□□ 1.37
SOX1-201ENST00000330949 SNAI1O95863 264 aaPredicted RBP23.58■■□□□ 1.37
SOX1-201ENST00000330949 CSF3P09919 207 aa23.58■■□□□ 1.37
SOX1-201ENST00000330949 OR4M2Q8NGB6 313 aa23.58■■□□□ 1.37
SOX1-201ENST00000330949 LHFPL5Q8TAF8 219 aa23.58■■□□□ 1.37
SOX1-201ENST00000330949 SMOQ99835 787 aa23.58■■□□□ 1.37
SOX1-201ENST00000330949 CDCA4Q9BXL8 241 aa23.58■■□□□ 1.37
SOX1-201ENST00000330949 SLC23A1Q9UHI7 598 aa23.58■■□□□ 1.37
SOX1-201ENST00000330949 KCNE2Q9Y6J6 123 aa23.58■■□□□ 1.37
SOX1-201ENST00000330949 GFRA2O00451 464 aa23.58■■□□□ 1.36
SOX1-201ENST00000330949 CXCL11O14625 94 aa23.58■■□□□ 1.36
SOX1-201ENST00000330949 CHMP24386 653 aa23.58■■□□□ 1.36
SOX1-201ENST00000330949 DSC2Q02487 901 aa23.58■■□□□ 1.36
SOX1-201ENST00000330949 TTLL9Q3SXZ7 439 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms