RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 PRAP1Q96NZ9 151 aa26.37■■□□□ 1.81
ATPAF1-201ENST00000329231 MCMBPQ9BTE3 642 aa26.37■■□□□ 1.81
ATPAF1-201ENST00000329231 LRRC1Q9BTT6 524 aa26.37■■□□□ 1.81
ATPAF1-201ENST00000329231 WDR54Q9H977 334 aa26.37■■□□□ 1.81
ATPAF1-201ENST00000329231 TP53TG5Q9Y2B4 290 aa26.37■■□□□ 1.81
ATPAF1-201ENST00000329231 BOD1L1Q8NFC6 3051 aa26.36■■□□□ 1.81
ATPAF1-201ENST00000329231 TCRBV9S1A1TA0A576 114 aa26.36■■□□□ 1.81
ATPAF1-201ENST00000329231 CTAGE15A4D2H0 777 aa26.36■■□□□ 1.81
ATPAF1-201ENST00000329231 SUV39H1O43463 412 aa26.36■■□□□ 1.81
ATPAF1-201ENST00000329231 CTAGE8P0CG41 777 aa26.36■■□□□ 1.81
ATPAF1-201ENST00000329231 TAS2R39P59534 338 aa26.36■■□□□ 1.81
ATPAF1-201ENST00000329231 CHAF1BQ13112 559 aa26.36■■□□□ 1.81
ATPAF1-201ENST00000329231 ATP1A4Q13733 1029 aa26.36■■□□□ 1.81
ATPAF1-201ENST00000329231 CAPN13Q6MZZ7 669 aaPredicted RBP26.36■■□□□ 1.81
ATPAF1-201ENST00000329231 TMEM207Q6UWW9 146 aa26.36■■□□□ 1.81
ATPAF1-201ENST00000329231 ATG14Q6ZNE5 492 aa26.36■■□□□ 1.81
ATPAF1-201ENST00000329231 MRGPREQ86SM8 312 aa26.36■■□□□ 1.81
ATPAF1-201ENST00000329231 CTAGE6Q86UF2 777 aa26.36■■□□□ 1.81
ATPAF1-201ENST00000329231 CCDC25Q86WR0 208 aa26.36■■□□□ 1.81
ATPAF1-201ENST00000329231 CTAGE4Q8IX94 777 aa26.36■■□□□ 1.81
ATPAF1-201ENST00000329231 ATL1Q8WXF7 558 aa26.36■■□□□ 1.81
ATPAF1-201ENST00000329231 ANKRD7Q92527 254 aa26.36■■□□□ 1.81
ATPAF1-201ENST00000329231 ALKBH8Q96BT7 664 aaKnown RBP26.36■■□□□ 1.81
ATPAF1-201ENST00000329231 CABS1Q96KC9 395 aa26.36■■□□□ 1.81
ATPAF1-201ENST00000329231 CPNE1Q99829 537 aa26.36■■□□□ 1.81
ATPAF1-201ENST00000329231 SGPP1Q9BX95 441 aa26.36■■□□□ 1.81
ATPAF1-201ENST00000329231 SLC26A1Q9H2B4 701 aa26.36■■□□□ 1.81
ATPAF1-201ENST00000329231 NXT1Q9UKK6 140 aaKnown RBP26.36■■□□□ 1.81
ATPAF1-201ENST00000329231 NOVA2Q9UNW9 492 aaKnown RBP26.36■■□□□ 1.81
ATPAF1-201ENST00000329231 HAT1O14929 419 aa26.35■■□□□ 1.81
ATPAF1-201ENST00000329231 PIAS1O75925 651 aa26.35■■□□□ 1.81
ATPAF1-201ENST00000329231 OR1D4P47884 311 aa26.35■■□□□ 1.81
ATPAF1-201ENST00000329231 CCL11P51671 97 aa26.35■■□□□ 1.81
ATPAF1-201ENST00000329231 SLC12A2P55011 1212 aa26.35■■□□□ 1.81
ATPAF1-201ENST00000329231 TRADDQ15628 312 aa26.35■■□□□ 1.81
ATPAF1-201ENST00000329231 ZDHHC24Q6UX98 284 aa26.35■■□□□ 1.81
ATPAF1-201ENST00000329231 COX15Q7KZN9 410 aa26.35■■□□□ 1.81
ATPAF1-201ENST00000329231 C17orf64Q86WR6 236 aa26.35■■□□□ 1.81
ATPAF1-201ENST00000329231 METTL27Q8N6F8 245 aaPredicted RBP26.35■■□□□ 1.81
ATPAF1-201ENST00000329231 ZDHHC19Q8WVZ1 309 aaPredicted RBP26.35■■□□□ 1.81
ATPAF1-201ENST00000329231 POPDC3Q9HBV1 291 aa26.35■■□□□ 1.81
ATPAF1-201ENST00000329231 ZNF304Q9HCX3 659 aa26.35■■□□□ 1.81
ATPAF1-201ENST00000329231 MAU2Q9Y6X3 613 aa26.35■■□□□ 1.81
ATPAF1-201ENST00000329231 FAM159BA6NKW6 160 aa26.34■■□□□ 1.81
ATPAF1-201ENST00000329231 CXorf49A8MYA2 514 aaPredicted RBP26.34■■□□□ 1.81
ATPAF1-201ENST00000329231 J3QKU1 62 aa26.34■■□□□ 1.81
ATPAF1-201ENST00000329231 PEX12O00623 359 aa26.34■■□□□ 1.81
ATPAF1-201ENST00000329231 MED26O95402 600 aa26.34■■□□□ 1.81
ATPAF1-201ENST00000329231 IGHEP01854 428 aa26.34■■□□□ 1.81
ATPAF1-201ENST00000329231 MAGEA4P43358 317 aa26.34■■□□□ 1.81
ATPAF1-201ENST00000329231 SLC7A5Q01650 507 aa26.34■■□□□ 1.81
ATPAF1-201ENST00000329231 POU4F1Q01851 419 aa26.34■■□□□ 1.81
ATPAF1-201ENST00000329231 GARNL3Q5VVW2 1013 aa26.34■■□□□ 1.81
ATPAF1-201ENST00000329231 LCTLQ6UWM7 567 aa26.34■■□□□ 1.81
ATPAF1-201ENST00000329231 COL26A1Q96A83 441 aa26.34■■□□□ 1.81
ATPAF1-201ENST00000329231 NACC2Q96BF6 587 aa26.34■■□□□ 1.81
ATPAF1-201ENST00000329231 FBXL8Q96CD0 374 aa26.34■■□□□ 1.81
ATPAF1-201ENST00000329231 C10orf90Q96M02 699 aa26.34■■□□□ 1.81
ATPAF1-201ENST00000329231 HAUS8Q9BT25 410 aa26.34■■□□□ 1.81
ATPAF1-201ENST00000329231 SLC25A23Q9BV35 468 aa26.34■■□□□ 1.81
ATPAF1-201ENST00000329231 ANAPC2Q9UJX6 822 aa26.34■■□□□ 1.81
ATPAF1-201ENST00000329231 CDC14AQ9UNH5 594 aa26.34■■□□□ 1.81
ATPAF1-201ENST00000329231 RUVBL1Q9Y265 456 aaKnown RBP26.34■■□□□ 1.81
ATPAF1-201ENST00000329231 PCDHGA9Q9Y5G4 932 aaKnown RBP26.34■■□□□ 1.81
ATPAF1-201ENST00000329231 HEATR5BQ9P2D3 2071 aa26.34■■□□□ 1.81
ATPAF1-201ENST00000329231 UMODP07911 640 aa26.33■■□□□ 1.81
ATPAF1-201ENST00000329231 GPX6P59796 221 aa26.33■■□□□ 1.81
ATPAF1-201ENST00000329231 RPS15AP62244 130 aaKnown RBP26.33■■□□□ 1.81
ATPAF1-201ENST00000329231 ZNF460Q14592 562 aa26.33■■□□□ 1.81
ATPAF1-201ENST00000329231 NKG7Q16617 165 aa26.33■■□□□ 1.81
ATPAF1-201ENST00000329231 HKDC1Q2TB90 917 aa26.33■■□□□ 1.81
ATPAF1-201ENST00000329231 SBSNQ6UWP8 590 aa26.33■■□□□ 1.81
ATPAF1-201ENST00000329231 ASB18Q6ZVZ8 466 aa26.33■■□□□ 1.81
ATPAF1-201ENST00000329231 PLD3Q8IV08 490 aa26.33■■□□□ 1.81
ATPAF1-201ENST00000329231 OR56A3Q8NH54 315 aa26.33■■□□□ 1.81
ATPAF1-201ENST00000329231 THAP11Q96EK4 314 aa26.33■■□□□ 1.81
ATPAF1-201ENST00000329231 MVB12AQ96EY5 273 aa26.33■■□□□ 1.81
ATPAF1-201ENST00000329231 TSPAN17Q96FV3 270 aa26.33■■□□□ 1.81
ATPAF1-201ENST00000329231 FER1L6-AS2Q96M78 137 aa26.33■■□□□ 1.81
ATPAF1-201ENST00000329231 SYNPO2LQ9H987 977 aa26.33■■□□□ 1.81
ATPAF1-201ENST00000329231 GPAMQ9HCL2 828 aa26.33■■□□□ 1.81
ATPAF1-201ENST00000329231 G3BP2Q9UN86 482 aaKnown RBP26.33■■□□□ 1.81
ATPAF1-201ENST00000329231 GUCA1CO95843 209 aa26.32■■□□□ 1.8
ATPAF1-201ENST00000329231 GP5P40197 560 aa26.32■■□□□ 1.8
ATPAF1-201ENST00000329231 FOXL2P58012 376 aa26.32■■□□□ 1.8
ATPAF1-201ENST00000329231 CEP97Q8IW35 865 aa26.32■■□□□ 1.8
ATPAF1-201ENST00000329231 DTWD1Q8N5C7 304 aa26.32■■□□□ 1.8
ATPAF1-201ENST00000329231 CEP112Q8N8E3 955 aa26.32■■□□□ 1.8
ATPAF1-201ENST00000329231 NOA1Q8NC60 698 aaKnown RBP26.32■■□□□ 1.8
ATPAF1-201ENST00000329231 SPSB2Q99619 263 aa26.32■■□□□ 1.8
ATPAF1-201ENST00000329231 CTSFQ9UBX1 484 aa26.32■■□□□ 1.8
ATPAF1-201ENST00000329231 IKZF3Q9UKT9 509 aa26.32■■□□□ 1.8
ATPAF1-201ENST00000329231 MTO1Q9Y2Z2 717 aaKnown RBP26.32■■□□□ 1.8
ATPAF1-201ENST00000329231 KCNE1BA0A087WTH5 132 aa26.31■■□□□ 1.8
ATPAF1-201ENST00000329231 ESYT3A0FGR9 886 aa26.31■■□□□ 1.8
ATPAF1-201ENST00000329231 K7EM74 188 aa26.31■■□□□ 1.8
ATPAF1-201ENST00000329231 PRPF4O43172 522 aaKnown RBP eCLIP26.31■■□□□ 1.8
ATPAF1-201ENST00000329231 NPPBP16860 134 aa26.31■■□□□ 1.8
ATPAF1-201ENST00000329231 NR1D1P20393 614 aa26.31■■□□□ 1.8
ATPAF1-201ENST00000329231 STX2P32856 288 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms