RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 RBFAQ8N0V3 343 aa11.52□□□□□ -0.57
SHMT2-201ENST00000328923 MS4A15Q8N5U1 240 aa11.52□□□□□ -0.57
SHMT2-201ENST00000328923 RAD51AP1Q96B01 352 aa11.52□□□□□ -0.57
SHMT2-201ENST00000328923 PIWIL1Q96J94 861 aaKnown RBP11.52□□□□□ -0.57
SHMT2-201ENST00000328923 QRFPRQ96P65 431 aa11.52□□□□□ -0.57
SHMT2-201ENST00000328923 GAL3ST1Q99999 423 aa11.52□□□□□ -0.57
SHMT2-201ENST00000328923 RBM4BQ9BQ04 359 aaKnown RBP11.52□□□□□ -0.57
SHMT2-201ENST00000328923 RTP3Q9BQQ7 232 aa11.52□□□□□ -0.57
SHMT2-201ENST00000328923 RBM4Q9BWF3 364 aaKnown RBP11.52□□□□□ -0.57
SHMT2-201ENST00000328923 MUC13Q9H3R2 512 aa11.52□□□□□ -0.57
SHMT2-201ENST00000328923 MEAF6Q9HAF1 191 aa11.52□□□□□ -0.57
SHMT2-201ENST00000328923 BABAM2Q9NXR7 383 aa11.52□□□□□ -0.57
SHMT2-201ENST00000328923 C3orf18Q9UK00 162 aa11.52□□□□□ -0.57
SHMT2-201ENST00000328923 GABRQQ9UN88 632 aa11.52□□□□□ -0.57
SHMT2-201ENST00000328923 MAFBQ9Y5Q3 323 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-201ENST00000328923 EFCAB7A8K855 629 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 CBX4O00257 560 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 KIAA0513O60268 411 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 EIF3GO75821 320 aaKnown RBP eCLIP11.51□□□□□ -0.57
SHMT2-201ENST00000328923 APEHP13798 732 aaKnown RBP11.51□□□□□ -0.57
SHMT2-201ENST00000328923 PREPP48147 710 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 OR4D2P58180 307 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 PAN3Q58A45 887 aaKnown RBP11.51□□□□□ -0.57
SHMT2-201ENST00000328923 RTL4Q6ZR62 310 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 USP45Q70EL2 814 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 TMEM179BQ7Z7N9 219 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 RNF135Q8IUD6 432 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 FAM86B1Q8N7N1 296 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 EDARADDQ8WWZ3 215 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 TBC1D20Q96BZ9 403 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 TRMT2BQ96GJ1 504 aaKnown RBP11.51□□□□□ -0.57
SHMT2-201ENST00000328923 ZNF285Q96NJ3 590 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 AGAP2Q99490 1192 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 GSX2Q9BZM3 304 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 CLEC4MQ9H2X3 399 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-201ENST00000328923 OSGEPL1Q9H4B0 414 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 ELP3Q9H9T3 547 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 CARS2Q9HA77 564 aaKnown RBP11.51□□□□□ -0.57
SHMT2-201ENST00000328923 ZFP64Q9NPA5 681 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 UTS2RQ9UKP6 389 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 ENTPD4Q9Y227 616 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 NDUFAF1Q9Y375 327 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 USP3Q9Y6I4 520 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 MYO18AQ92614 2054 aaKnown RBP11.51□□□□□ -0.57
SHMT2-201ENST00000328923 TEX46H3BTG2 121 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 PLOD3O60568 738 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 APOL3O95236 402 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 HRGP04196 525 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 HPGDP15428 266 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 RAB25P57735 213 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 PSPHP78330 225 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 SLC6A3Q01959 620 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 SP4Q02446 784 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 VEPH1Q14D04 833 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 TAF1CQ15572 869 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-201ENST00000328923 MICAQ29983 383 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 HFEQ30201 348 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 CDKL4Q5MAI5 379 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 TSTD2Q5T7W7 516 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 ZDHHC17Q8IUH5 632 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 DENND1CQ8IV53 801 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 OR8D4Q8NGM9 314 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 CENPIQ92674 756 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-201ENST00000328923 MYLPFQ96A32 169 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 NSMCE2Q96MF7 247 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 C11orf84Q9BUA3 381 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-201ENST00000328923 HTATIP2Q9BUP3 242 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 SMPD4Q9NXE4 827 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 SIX4Q9UIU6 781 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 SESN1Q9Y6P5 492 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 MGAMO43451 1857 aa11.51□□□□□ -0.57
SHMT2-201ENST00000328923 A0A0G2JLL6 359 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-201ENST00000328923 TCRBV16S1A1N1A0A5B0 115 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 H7C2Y5 167 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 SIGLEC5O15389 551 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 SLC16A6O15403 523 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 POP7O75817 140 aaKnown RBP11.5□□□□□ -0.57
SHMT2-201ENST00000328923 ARSBP15848 533 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 PSMB4P28070 264 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 AVPR1AP37288 418 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 CRISP3P54108 245 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 SNX16P57768 344 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 POU4F1Q01851 419 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 SIGLEC14Q08ET2 396 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.5□□□□□ -0.57
SHMT2-201ENST00000328923 RUNDC3AQ59EK9 446 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 SPOUT1Q5T280 376 aaKnown RBP11.5□□□□□ -0.57
SHMT2-201ENST00000328923 PRRT2Q7Z6L0 340 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-201ENST00000328923 KCNMB4Q86W47 210 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 DMRTC2Q8IXT2 367 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-201ENST00000328923 LNX2Q8N448 690 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 SPATA6LQ8N4H0 392 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 GPR156Q8NFN8 814 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 WDR36Q8NI36 951 aaKnown RBP11.5□□□□□ -0.57
SHMT2-201ENST00000328923 UBE2FQ969M7 185 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 UPRTQ96BW1 309 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 SENP8Q96LD8 212 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 PAPOLGQ9BWT3 736 aaKnown RBP11.5□□□□□ -0.57
SHMT2-201ENST00000328923 RHOJQ9H4E5 214 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 UCK1Q9HA47 277 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms