RNA–Protein interactions for RNA: ENST00000328020.10

CMTM1-201, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-201ENST00000328020 IRAK4Q9NWZ3 460 aa13.53□□□□□ -0.24
CMTM1-201ENST00000328020 SLC39A1Q9NY26 324 aa13.53□□□□□ -0.24
CMTM1-201ENST00000328020 RARRES3Q9UL19 164 aa13.53□□□□□ -0.24
CMTM1-201ENST00000328020 PCDHGA8Q9Y5G5 932 aa13.53□□□□□ -0.24
CMTM1-201ENST00000328020 OR2A25A4D2G3 310 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 G3V2L1 256 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 H3BQF6 201 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 UGDHO60701 494 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 SUPT7LO94864 414 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 MLYCDO95822 493 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 ADRB1P08588 477 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 SBK3P0C264 359 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 C1GALT1C1LP0DN25 315 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 GSTM2P28161 218 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 ARL1P40616 181 aaPredicted RBP13.52□□□□□ -0.25
CMTM1-201ENST00000328020 MC2RQ01718 297 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 TBCCQ15814 346 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 ZXDCQ2QGD7 858 aaPredicted RBP13.52□□□□□ -0.25
CMTM1-201ENST00000328020 FBXO48Q5FWF7 155 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 XKR6Q5GH73 641 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 C3orf38Q5JPI3 329 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 TCTE1Q5JU00 501 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 DCAF12Q5T6F0 453 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 HHATQ5VTY9 493 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 LIPMQ5VYY2 423 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 ATG9BQ674R7 924 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 ZNF425Q6IV72 752 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 FOXR1Q6PIV2 292 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 TMPRSS11BQ86T26 416 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 PAQR7Q86WK9 346 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 PPP1R3BQ86XI6 285 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 FAM20CQ8IXL6 584 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 ZNF655Q8N720 491 aaPredicted RBP13.52□□□□□ -0.25
CMTM1-201ENST00000328020 TTLQ8NG68 377 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 ESAMQ96AP7 390 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 NXPE2Q96DL1 559 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 L3HYPDHQ96EM0 354 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 PTCD3Q96EY7 689 aaKnown RBP13.52□□□□□ -0.25
CMTM1-201ENST00000328020 FCRL4Q96PJ5 515 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 OR6C1Q96RD1 312 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 ZFYVE21Q9BQ24 234 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 DRC3Q9H069 523 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 IPPKQ9H8X2 491 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 ACTR8Q9H981 624 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 PRM3Q9NNZ6 103 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 OXSMQ9NWU1 459 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 PISDQ9UG56 409 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 SATB2Q9UPW6 733 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 KLHL20Q9Y2M5 609 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 DCHS1Q96JQ0 3298 aa13.52□□□□□ -0.25
CMTM1-201ENST00000328020 COL27A1Q8IZC6 1860 aaPredicted RBP13.51□□□□□ -0.25
CMTM1-201ENST00000328020 TRBC2A0A5B9 178 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 TMEM150CB9EJG8 249 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 E2F3O00716 465 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 BIRC5O15392 142 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 TRIM13O60858 407 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 SASH3O75995 380 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 SIX3O95343 332 aaPredicted RBP13.51□□□□□ -0.25
CMTM1-201ENST00000328020 OTCP00480 354 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 RPS17P08708 135 aaKnown RBP13.51□□□□□ -0.25
CMTM1-201ENST00000328020 EBLN1P0CF75 366 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 NEFHP12036 1026 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 CREB1P16220 341 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 HPDP32754 393 aaPredicted RBP13.51□□□□□ -0.25
CMTM1-201ENST00000328020 HNF4AP41235 474 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 CASP2P42575 452 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 CCNG1P51959 295 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 MAPK10P53779 464 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 ITGA1P56199 1179 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 GABREP78334 506 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 PCDH1Q08174 1060 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 RBBP7Q16576 425 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 ZNF678Q5SXM1 525 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 LIPJQ5W064 366 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 FCRL6Q6DN72 434 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 SLCO4C1Q6ZQN7 724 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 GOLGA7Q7Z5G4 137 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 MCATQ8IVS2 390 aaKnown RBP13.51□□□□□ -0.25
CMTM1-201ENST00000328020 DNAJC22Q8N4W6 341 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 CCNYL1Q8N7R7 359 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 OR4K1Q8NGD4 311 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 PPP1R14CQ8TAE6 165 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 ARL8AQ96BM9 186 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 REPS1Q96D71 796 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 SEC16BQ96JE7 1060 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 SELENOSQ9BQE4 189 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 TRMOQ9BU70 441 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 DDA1Q9BW61 102 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 SCNM1Q9BWG6 230 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 MED4Q9NPJ6 270 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 CUEDC1Q9NWM3 386 aaPredicted RBP13.51□□□□□ -0.25
CMTM1-201ENST00000328020 ZNF446Q9NWS9 450 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 OCIAD1Q9NX40 245 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 SIDT1Q9NXL6 827 aaKnown RBP13.51□□□□□ -0.25
CMTM1-201ENST00000328020 SLC17A7Q9P2U7 560 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 PCTPQ9UKL6 214 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 MSRB2Q9Y3D2 182 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 AK5Q9Y6K8 562 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 AP1M2Q9Y6Q5 423 aa13.51□□□□□ -0.25
CMTM1-201ENST00000328020 NCOR2Q9Y618 2525 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms