RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 DDX53Q86TM3 631 aaKnown RBP6.88□□□□□ -1.31
SMC1A-201ENST00000322213 HSH2DQ96JZ2 352 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 PSD2Q9BQI7 771 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 ASPNQ9BXN1 380 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 RANGRFQ9HD47 186 aaPredicted RBP6.88□□□□□ -1.31
SMC1A-201ENST00000322213 CBY1Q9Y3M2 126 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.88□□□□□ -1.31
SMC1A-201ENST00000322213 VTNP04004 478 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 HIST1H2ABP04908 130 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 SAGP10523 405 aaPredicted RBP6.88□□□□□ -1.31
SMC1A-201ENST00000322213 HLA-EP13747 358 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 PRMT2P55345 433 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 RHOAP61586 193 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 CAMK2BQ13554 666 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 CPSF6Q16630 551 aaKnown RBP eCLIP6.88□□□□□ -1.312e-8■■□□□ 12.9
SMC1A-201ENST00000322213 BCL2L15Q5TBC7 163 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 HIST3H2AQ7L7L0 130 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 OR9I1Q8NGQ6 314 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 PIGKQ92643 395 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 HIST1H2ACQ93077 130 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 MUL1Q969V5 352 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 PRR11Q96HE9 360 aaPredicted RBP6.88□□□□□ -1.31
SMC1A-201ENST00000322213 TAAR1Q96RJ0 339 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 TWNKQ96RR1 684 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 ZNF395Q9H8N7 513 aaPredicted RBP6.88□□□□□ -1.31
SMC1A-201ENST00000322213 WDR70Q9NW82 654 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 ACTR10Q9NZ32 417 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 ERVW-1Q9UQF0 538 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 LRRC14BA6NHZ5 514 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 INMT-MINDY4F8WBC2 141 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 STK16O75716 305 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 GADD45GO95257 159 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 RHOCP08134 193 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 CDH5P33151 784 aaPredicted RBP6.88□□□□□ -1.31
SMC1A-201ENST00000322213 CA5AP35218 305 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 KIAA0930Q6ICG6 404 aaPredicted RBP6.88□□□□□ -1.31
SMC1A-201ENST00000322213 NANOGP8Q6NSW7 305 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 MIB1Q86YT6 1006 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 LSMEM1Q8N8F7 131 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 ATAD1Q8NBU5 361 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 S100A16Q96FQ6 103 aaKnown RBP6.88□□□□□ -1.31
SMC1A-201ENST00000322213 POLR2J3Q9H1A7 115 aaKnown RBP6.88□□□□□ -1.31
SMC1A-201ENST00000322213 NANOGQ9H9S0 305 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 MOCS1Q9NZB8 636 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 MGAT4AQ9UM21 535 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 TLR4O00206 839 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 CILPO75339 1184 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 WDPCPO95876 746 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 DEFA6Q01524 100 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 DSG2Q14126 1118 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 METTL7BQ6UX53 244 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 IGDCC3Q8IVU1 814 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 CADM3Q8N126 398 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 FCAMRQ8WWV6 532 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 COPS8Q99627 209 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 BARD1Q99728 777 aaKnown RBP6.88□□□□□ -1.31
SMC1A-201ENST00000322213 GFOD1Q9NXC2 390 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 POU2F3Q9UKI9 436 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 MAP4K5Q9Y4K4 846 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 HMX3A6NHT5 357 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 DYNC1LI2O43237 492 aaPredicted RBP6.88□□□□□ -1.31
SMC1A-201ENST00000322213 HLA-DQA2P01906 255 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 HLA-DPB1P04440 258 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 ZNF286BP0CG31 522 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 CASP3P42574 277 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 KEAP1Q14145 624 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 MSANTD1Q6ZTZ1 278 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 MTG2Q9H4K7 406 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 PCDHGA7Q9Y5G6 932 aa6.88□□□□□ -1.31
SMC1A-201ENST00000322213 YDJCA8MPS7 323 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 LYPLA2O95372 231 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 IRF1P10914 325 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 GAD2Q05329 585 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 NKX1-1Q15270 411 aaPredicted RBP6.87□□□□□ -1.31
SMC1A-201ENST00000322213 CMTR2Q8IYT2 770 aaKnown RBP6.87□□□□□ -1.31
SMC1A-201ENST00000322213 PARP16Q8N5Y8 322 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 ZNF614Q8N883 585 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 SAMD12Q8N8I0 201 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 HJURPQ8NCD3 748 aaPredicted RBP6.87□□□□□ -1.31
SMC1A-201ENST00000322213 CMASQ8NFW8 434 aaPredicted RBP6.87□□□□□ -1.31
SMC1A-201ENST00000322213 CLP1Q92989 425 aaKnown RBP6.87□□□□□ -1.31
SMC1A-201ENST00000322213 TMEM203Q969S6 136 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 TMIGD2Q96BF3 282 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 MYRFLQ96LU7 910 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 MAPKAP1Q9BPZ7 522 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 GPR88Q9GZN0 384 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 MIOSQ9NXC5 875 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 ADAM23O75077 832 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 B3GAT3O94766 335 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 ESR1P03372 595 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 NUDT7P0C024 238 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 POU2F1P14859 743 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 HTR1EP28566 365 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 ZNF132P52740 706 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 GPR85P60893 370 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 DBPQ10586 325 aaPredicted RBP6.87□□□□□ -1.31
SMC1A-201ENST00000322213 KCNAB2Q13303 367 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 BTN1A1Q13410 526 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 FGFBP1Q14512 234 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 ARMC12Q5T9G4 340 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms