RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 HMGCS1Q01581 520 aa18.84■□□□□ 0.61
ZNF554-201ENST00000317243 NFATC2Q13469 925 aa18.84■□□□□ 0.61
ZNF554-201ENST00000317243 GTDC1Q4AE62 458 aa18.84■□□□□ 0.61
ZNF554-201ENST00000317243 PRSS48Q7RTY5 328 aa18.84■□□□□ 0.61
ZNF554-201ENST00000317243 HJURPQ8NCD3 748 aaPredicted RBP18.84■□□□□ 0.61
ZNF554-201ENST00000317243 GPR26Q8NDV2 337 aa18.84■□□□□ 0.61
ZNF554-201ENST00000317243 TRMT2BQ96GJ1 504 aaKnown RBP18.84■□□□□ 0.61
ZNF554-201ENST00000317243 TMEM246Q9BRR3 403 aa18.84■□□□□ 0.61
ZNF554-201ENST00000317243 PLSCR3Q9NRY6 295 aa18.84■□□□□ 0.61
ZNF554-201ENST00000317243 FAM8A1Q9UBU6 413 aa18.84■□□□□ 0.61
ZNF554-201ENST00000317243 DHRS7Q9Y394 339 aa18.84■□□□□ 0.61
ZNF554-201ENST00000317243 NEUROG3Q9Y4Z2 214 aa18.84■□□□□ 0.61
ZNF554-201ENST00000317243 AP3D1O14617 1153 aa18.83■□□□□ 0.61
ZNF554-201ENST00000317243 MTX2O75431 263 aa18.83■□□□□ 0.61
ZNF554-201ENST00000317243 URODP06132 367 aa18.83■□□□□ 0.61
ZNF554-201ENST00000317243 PSMA3P25788 255 aa18.83■□□□□ 0.61
ZNF554-201ENST00000317243 SLC35A2P78381 396 aa18.83■□□□□ 0.61
ZNF554-201ENST00000317243 CHRNEQ04844 493 aa18.83■□□□□ 0.61
ZNF554-201ENST00000317243 EID3Q8N140 333 aa18.83■□□□□ 0.61
ZNF554-201ENST00000317243 PARP16Q8N5Y8 322 aa18.83■□□□□ 0.61
ZNF554-201ENST00000317243 ZNF540Q8NDQ6 660 aa18.83■□□□□ 0.61
ZNF554-201ENST00000317243 QPCTLQ9NXS2 382 aa18.83■□□□□ 0.61
ZNF554-201ENST00000317243 FFAR2O15552 330 aa18.83■□□□□ 0.6
ZNF554-201ENST00000317243 ESR1P03372 595 aa18.83■□□□□ 0.6
ZNF554-201ENST00000317243 DCTP40126 519 aa18.83■□□□□ 0.6
ZNF554-201ENST00000317243 EPHB3P54753 998 aa18.83■□□□□ 0.6
ZNF554-201ENST00000317243 BCL2L1Q07817 233 aa18.83■□□□□ 0.6
ZNF554-201ENST00000317243 CYP4F3Q08477 520 aa18.83■□□□□ 0.6
ZNF554-201ENST00000317243 MAPKAPK3Q16644 382 aa18.83■□□□□ 0.6
ZNF554-201ENST00000317243 INO80DQ53TQ3 878 aaPredicted RBP18.83■□□□□ 0.6
ZNF554-201ENST00000317243 SIGIRRQ6IA17 410 aa18.83■□□□□ 0.6
ZNF554-201ENST00000317243 ZCCHC8Q6NZY4 707 aaKnown RBP18.83■□□□□ 0.6
ZNF554-201ENST00000317243 ZNF548Q8NEK5 533 aaPredicted RBP18.83■□□□□ 0.6
ZNF554-201ENST00000317243 CLHC1Q8NHS4 586 aa18.83■□□□□ 0.6
ZNF554-201ENST00000317243 SUN5Q8TC36 379 aa18.83■□□□□ 0.6
ZNF554-201ENST00000317243 SLC13A3Q8WWT9 602 aa18.83■□□□□ 0.6
ZNF554-201ENST00000317243 DEPDC7Q96QD5 511 aa18.83■□□□□ 0.6
ZNF554-201ENST00000317243 CLPBQ9H078 707 aa18.83■□□□□ 0.6
ZNF554-201ENST00000317243 IPPKQ9H8X2 491 aa18.83■□□□□ 0.6
ZNF554-201ENST00000317243 USE1Q9NZ43 259 aa18.83■□□□□ 0.6
ZNF554-201ENST00000317243 TMEFF2Q9UIK5 374 aaPredicted RBP18.83■□□□□ 0.6
ZNF554-201ENST00000317243 STOML2Q9UJZ1 356 aa18.83■□□□□ 0.6
ZNF554-201ENST00000317243 ELOVL7A1L3X0 281 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 H7C0S8 307 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 GFRA2O00451 464 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 CXCR6O00574 342 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 TGM5O43548 720 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 B3GALT4O96024 378 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 TRBC1P01850 177 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 CSF2RAP15509 400 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 RYKP34925 604 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 CCR2P41597 374 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 RAB33AQ14088 237 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 CDKN3Q16667 212 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 ASTLQ6HA08 431 aaPredicted RBP18.82■□□□□ 0.6
ZNF554-201ENST00000317243 PEX5LQ8IYB4 626 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 ST13P5Q8NFI4 369 aaPredicted RBP18.82■□□□□ 0.6
ZNF554-201ENST00000317243 REXO5Q96IC2 774 aaKnown RBP18.82■□□□□ 0.6
ZNF554-201ENST00000317243 ACOT13Q9NPJ3 140 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 ABCB8Q9NUT2 735 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 MRPL19P49406 292 aaKnown RBP18.82■□□□□ 0.6
ZNF554-201ENST00000317243 OR2B6P58173 313 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 GTF2H2Q13888 395 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 TPRG1LQ5T0D9 272 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 NXNL2Q5VZ03 156 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 TPGS2Q68CL5 300 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 GTF2H2CQ6P1K8 395 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 DCAF4L2Q8NA75 395 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 EGFL8Q99944 293 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 MMP27Q9H306 513 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 DUSP21Q9H596 190 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 GORASP2Q9H8Y8 452 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 PAK6Q9NQU5 681 aaPredicted RBP18.82■□□□□ 0.6
ZNF554-201ENST00000317243 HEBP1Q9NRV9 189 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 MRPL17Q9NRX2 175 aaKnown RBP18.82■□□□□ 0.6
ZNF554-201ENST00000317243 ANGPTL3Q9Y5C1 460 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 SCN8AQ9UQD0 1980 aa18.82■□□□□ 0.6
ZNF554-201ENST00000317243 CLCN4P51793 760 aa18.81■□□□□ 0.6
ZNF554-201ENST00000317243 ZFP69Q49AA0 526 aa18.81■□□□□ 0.6
ZNF554-201ENST00000317243 SPANXN4Q5MJ08 99 aa18.81■□□□□ 0.6
ZNF554-201ENST00000317243 KRTCAP2Q8N6L1 136 aa18.81■□□□□ 0.6
ZNF554-201ENST00000317243 ZNF382Q96SR6 550 aa18.81■□□□□ 0.6
ZNF554-201ENST00000317243 RIBC2Q9H4K1 309 aa18.81■□□□□ 0.6
ZNF554-201ENST00000317243 TPRKBQ9Y3C4 175 aa18.81■□□□□ 0.6
ZNF554-201ENST00000317243 ORC6Q9Y5N6 252 aa18.81■□□□□ 0.6
ZNF554-201ENST00000317243 METTL15A6NJ78 407 aa18.81■□□□□ 0.6
ZNF554-201ENST00000317243 ARNTLO00327 626 aa18.81■□□□□ 0.6
ZNF554-201ENST00000317243 ANKRD28O15084 1053 aa18.81■□□□□ 0.6
ZNF554-201ENST00000317243 CCL5P13501 91 aa18.81■□□□□ 0.6
ZNF554-201ENST00000317243 TGFBR2P37173 567 aa18.81■□□□□ 0.6
ZNF554-201ENST00000317243 KRT6CP48668 564 aa18.81■□□□□ 0.6
ZNF554-201ENST00000317243 CDK10Q15131 360 aa18.81■□□□□ 0.6
ZNF554-201ENST00000317243 WDR45BQ5MNZ6 344 aa18.81■□□□□ 0.6
ZNF554-201ENST00000317243 OTOP2Q7RTS6 562 aa18.81■□□□□ 0.6
ZNF554-201ENST00000317243 MILR1Q7Z6M3 343 aa18.81■□□□□ 0.6
ZNF554-201ENST00000317243 ADHFE1Q8IWW8 467 aa18.81■□□□□ 0.6
ZNF554-201ENST00000317243 SVOPLQ8N434 492 aa18.81■□□□□ 0.6
ZNF554-201ENST00000317243 ZNF566Q969W8 418 aa18.81■□□□□ 0.6
ZNF554-201ENST00000317243 ZFYVE19Q96K21 471 aa18.81■□□□□ 0.6
ZNF554-201ENST00000317243 SNX18Q96RF0 628 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms