RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 DEFB126Q9BYW3 111 aa10.4□□□□□ -0.75
SYNPO2-201ENST00000307142 KCNK13Q9HB14 408 aa10.4□□□□□ -0.75
SYNPO2-201ENST00000307142 AKAP11Q9UKA4 1901 aa10.4□□□□□ -0.75
SYNPO2-201ENST00000307142 RBMXL2O75526 392 aaKnown RBP10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 SUOXP51687 545 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 TRAF3Q13114 568 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 TANGO2Q6ICL3 276 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 CXXC5Q7LFL8 322 aaKnown RBP10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 SLC30A8Q8IWU4 369 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 EID2Q8N6I1 236 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 SNX33Q8WV41 574 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 PSMD9O00233 223 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 ATP6V1G2O95670 118 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 AHSGP02765 367 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 LINGO3P0C6S8 592 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 IMPDH1P20839 514 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 CCNOP22674 350 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 FAM47BQ8NA70 645 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 UHRF1Q96T88 793 aaPredicted RBP10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 RASSF1Q9NS23 344 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 LYARQ9NX58 379 aaKnown RBP10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 TNRC6CQ9HCJ0 1690 aaKnown RBP10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 PNMA8CA0A1B0GUJ8 204 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 FAM234BA2RU67 622 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 TMEM63AO94886 807 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 NR2F6P10588 404 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 GP1BBP13224 206 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 STC1P52823 247 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 SCARB2Q14108 478 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 UBAP2Q5T6F2 1119 aaKnown RBP10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 FBXW8Q8N3Y1 598 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 GTPBP3Q969Y2 492 aaKnown RBP10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 CCDC28BQ9BUN5 200 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 SPATA7Q9P0W8 599 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 AGPSO00116 658 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 SNX3O60493 162 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 ACVR2AP27037 513 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 DNASE1L1P49184 302 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 TMEM240Q5SV17 173 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 CSNK1A1LQ8N752 337 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 CD244Q9BZW8 370 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 GIN1Q9NXP7 522 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 B4GALT7Q9UBV7 327 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 DOCK1Q14185 1865 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 A0A1B0GW55 424 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 MAFKO60675 156 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 DUX4L2P0CJ85 424 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 DUX4L3P0CJ86 424 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 DUX4L4P0CJ87 422 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 DUX4L5P0CJ88 424 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 DUX4L6P0CJ89 424 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 DUX4L7P0CJ90 424 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 MATN1P21941 496 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 GBX1Q14549 363 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 MED22Q15528 200 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 RBM20Q5T481 1227 aaKnown RBP10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 DCAF12L1Q5VU92 463 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 FAM69BQ5VUD6 431 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 RASSF6Q6ZTQ3 369 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 TTLL10Q6ZVT0 673 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 MFSD6LQ8IWD5 586 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 DUX4Q9UBX2 424 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 MRPS7Q9Y2R9 242 aaKnown RBP10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 NPIPA5E9PKD4 350 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 SRCP12931 536 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 SLC6A9P48067 706 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 MRPS35P82673 323 aaKnown RBP10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 KCNJ11Q14654 390 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 ATG14Q6ZNE5 492 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 DDX1Q92499 740 aaKnown RBP10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 PNPLA2Q96AD5 504 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 NSMCE3Q96MG7 304 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 GPATCH1Q9BRR8 931 aaKnown RBP10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 IFT27Q9BW83 186 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 ALG2Q9H553 416 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 ACTL8Q9H568 366 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 SEC61A2Q9H9S3 476 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 ZNF334Q9HCZ1 680 aaPredicted RBP10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 NPIPA1Q9UND3 350 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 RNF11Q9Y3C5 154 aa10.39□□□□□ -0.75
SYNPO2-201ENST00000307142 PRORSD1PA6NEY8 169 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 hCG_2039718K7EN88 272 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 PRPS1L1P21108 318 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 MRPS21P82921 87 aaKnown RBP10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 GLB1L3Q8NCI6 653 aaPredicted RBP10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 SH3YL1Q96HL8 342 aaPredicted RBP10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 APOOQ9BUR5 198 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 TESMINQ9Y4I5 508 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 IRGMA1A4Y4 181 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 DCNP07585 359 aaKnown RBP10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 P2RY2P41231 377 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 LIPEQ05469 1076 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 CD47Q08722 323 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 CDKN3Q16667 212 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 PDP2Q9P2J9 529 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 SCN9AQ15858 1988 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 PSMD11O00231 422 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 TP53I11O14683 189 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 SASH3O75995 380 aa10.38□□□□□ -0.75
SYNPO2-201ENST00000307142 HBQ1P09105 142 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms