RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 SLC22A3O75751 556 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 SCO1O75880 301 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 OR2B3O76000 313 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 DNTTP04053 509 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 SLC35E2BP0CK96 405 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 ETV3P41162 512 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 GALK2Q01415 458 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 CAMK1Q14012 370 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 STK11Q15831 433 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 LINC00299Q6ZSB3 139 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 DCAF4L2Q8NA75 395 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 OR2T12Q8NG77 320 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 SUSD6Q92537 303 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 BCL7BQ9BQE9 202 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 CLPBQ9H078 707 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 SEMA4BQ9NPR2 832 aaPredicted RBP10.6□□□□□ -0.71
LSM3-201ENST00000306024 EIF2B3Q9NR50 452 aaKnown RBP10.6□□□□□ -0.71
LSM3-201ENST00000306024 QPCTLQ9NXS2 382 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 TRMT6Q9UJA5 497 aaKnown RBP10.6□□□□□ -0.71
LSM3-201ENST00000306024 FBXO5Q9UKT4 447 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 PTGDR2Q9Y5Y4 395 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 NCF1BA6NI72 391 aaPredicted RBP10.6□□□□□ -0.71
LSM3-201ENST00000306024 NCF1CA8MVU1 366 aaPredicted RBP10.6□□□□□ -0.71
LSM3-201ENST00000306024 IGLV3-27P01718 113 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 AHSGP02765 367 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 LCKP06239 509 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 NCF1P14598 390 aaPredicted RBP10.6□□□□□ -0.71
LSM3-201ENST00000306024 TGFBR1P36897 503 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 SGSHP51688 502 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 TIGD6Q17RP2 521 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 SLC16A12Q6ZSM3 486 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 NRARPQ7Z6K4 114 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 CDYL2Q8N8U2 506 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 C19orf18Q8NEA5 215 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 OR52K2Q8NGK3 314 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 ANGPTL6Q8NI99 470 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 DEDD2Q8WXF8 326 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 ZSWIM3Q96MP5 696 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 TRMOQ9BU70 441 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 TRMT61BQ9BVS5 477 aaKnown RBP10.6□□□□□ -0.71
LSM3-201ENST00000306024 TRIM45Q9H8W5 580 aaPredicted RBP10.6□□□□□ -0.71
LSM3-201ENST00000306024 SNX7Q9UNH6 387 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 RNF6Q9Y252 685 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 GRIP1Q9Y3R0 1128 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 RAI2Q9Y5P3 530 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 ACTL7AQ9Y615 435 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 LOC105371267A0A1B0GV96 52 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 PABPN1LA6NDY0 278 aaKnown RBP10.59□□□□□ -0.71
LSM3-201ENST00000306024 INSIG1O15503 277 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 LINC01565O15544 149 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 RPLP0P05388 317 aaKnown RBP10.59□□□□□ -0.71
LSM3-201ENST00000306024 POLR2CP19387 275 aaPredicted RBP10.59□□□□□ -0.71
LSM3-201ENST00000306024 EEFSECP57772 596 aaKnown RBP10.59□□□□□ -0.71
LSM3-201ENST00000306024 GPLD1P80108 840 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 SCN1BQ07699 218 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 LAPTM4AQ15012 233 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 DHCR24Q15392 516 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 CRY1Q16526 586 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 TMPRSS11AQ6ZMR5 421 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 TMEM150AQ86TG1 271 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 METTL3Q86U44 580 aaKnown RBP10.59□□□□□ -0.71
LSM3-201ENST00000306024 NPAS3Q8IXF0 933 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 HCAR2Q8TDS4 363 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 CYB5D2Q8WUJ1 264 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 SIPA1Q96FS4 1042 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 ZNF599Q96NL3 588 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 ITPAQ9BY32 194 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 MEAF6Q9HAF1 191 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 STOML2Q9UJZ1 356 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 VWA8A3KMH1 1905 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 WASH4PA8MWX3 477 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 CDK2AP1O14519 115 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 PRMT5O14744 637 aaPredicted RBP10.59□□□□□ -0.71
LSM3-201ENST00000306024 CTPS1P17812 591 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 TIE1P35590 1138 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 OR4D2P58180 307 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 PRKG2Q13237 762 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 KLHL12Q53G59 568 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 PCID2Q5JVF3 399 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 MANEALQ5VSG8 457 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 GLT6D1Q7Z4J2 308 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 CHPFQ8IZ52 775 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 APCDD1Q8J025 514 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 SVOPLQ8N434 492 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 ZNF366Q8N895 744 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 OR9Q1Q8NGQ5 310 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 MYEOVQ96EZ4 313 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 GFM1Q96RP9 751 aaKnown RBP10.59□□□□□ -0.71
LSM3-201ENST00000306024 LRRC3Q9BY71 257 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 IMPAD1Q9NX62 359 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 TANC1Q9C0D5 1861 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 ALPLP05186 524 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 CD70P32970 193 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 MAPK8P45983 427 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 PSMD8P48556 350 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 IDH2P48735 452 aaKnown RBP10.59□□□□□ -0.71
LSM3-201ENST00000306024 MVKQ03426 396 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 ZRANB3Q5FWF4 1079 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 FBXO48Q5FWF7 155 aa10.59□□□□□ -0.71
LSM3-201ENST00000306024 FAM78AQ5JUQ0 283 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms