RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 OSGIN1Q9UJX0 560 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 RAB23Q9ULC3 237 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 CLCA3PQ9Y6N3 262 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 MANBAO00462 879 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 CDRT1O95170 752 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 IFNA14P01570 189 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 ATF4P18848 351 aaPredicted RBP12.67□□□□□ -0.38
TRIM35-201ENST00000305364 OR1E2P47887 323 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 MAPK12P53778 367 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 YBEYP58557 167 aaPredicted RBP12.67□□□□□ -0.38
TRIM35-201ENST00000305364 BEX3Q00994 111 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 IL18Q14116 193 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 GANABQ14697 944 aaKnown RBP12.67□□□□□ -0.38
TRIM35-201ENST00000305364 VEPH1Q14D04 833 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 XKR7Q5GH72 579 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 C16orf62Q7Z3J2 963 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 OR8H3Q8N146 312 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 DNAJB8Q8NHS0 232 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 CCDC115Q96NT0 180 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 SLA2Q9H6Q3 261 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 HNRNPCL2B2RXH8 293 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 EIF3FO00303 357 aaPredicted RBP12.66□□□□□ -0.38
TRIM35-201ENST00000305364 E2F3O00716 465 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 WNT9AO14904 365 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 PCDHGA12O60330 932 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 OR2B3O76000 313 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 TRBC1P01850 177 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 ANXA8P13928 327 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 IGFBP6P24592 240 aaPredicted RBP12.66□□□□□ -0.38
TRIM35-201ENST00000305364 PTGS2P35354 604 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 RGS6P49758 472 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 SRP54P61011 504 aaKnown RBP12.66□□□□□ -0.38
TRIM35-201ENST00000305364 DDI2Q5TDH0 399 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 PIK3R6Q5UE93 754 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 TLK2Q86UE8 772 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 SLC22A15Q8IZD6 547 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 C11orf65Q8NCR3 313 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 C9orf43Q8TAL5 461 aaPredicted RBP12.66□□□□□ -0.38
TRIM35-201ENST00000305364 TM6SF2Q9BZW4 377 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 IL1RAPQ9NPH3 570 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 GSTK1Q9Y2Q3 226 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 ASB1Q9Y576 335 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 DNMT3AQ9Y6K1 912 aaPredicted RBP12.66□□□□□ -0.38
TRIM35-201ENST00000305364 A0A0U1RQS6 177 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 MROH6A6NGR9 719 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 I3L521 148 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 INSIG1O15503 277 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 FHP07954 510 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 GSTM5P46439 218 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 CRYBB1P53674 252 aaPredicted RBP12.66□□□□□ -0.38
TRIM35-201ENST00000305364 CYP27C1Q4G0S4 372 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 MS4A13Q5J8X5 152 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 UMODL1-AS1Q8N2C9 162 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 OR5H6Q8NGV6 325 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 CEP295NLQ96MC4 621 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 NEDD4LQ96PU5 975 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 SMIM14Q96QK8 99 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 NLE1Q9NVX2 485 aaPredicted RBP12.66□□□□□ -0.38
TRIM35-201ENST00000305364 ZNF224Q9NZL3 707 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 ST3GAL5Q9UNP4 418 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 ITGA2P17301 1181 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 THPOP40225 353 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 HTR3AP46098 478 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 RPIAP49247 311 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 FADDQ13158 208 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 OR6K2Q8NGY2 324 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 TMEM40Q8WWA1 233 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 ZBED3Q96IU2 234 aaPredicted RBP12.66□□□□□ -0.38
TRIM35-201ENST00000305364 FYTTD1Q96QD9 318 aaKnown RBP12.66□□□□□ -0.38
TRIM35-201ENST00000305364 TSPAN18Q96SJ8 248 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 NMUR1Q9HB89 426 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 TLR9Q9NR96 1032 aa12.66□□□□□ -0.38
TRIM35-201ENST00000305364 CASKO14936 926 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 ANKRD28O15084 1053 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 OR10H3O60404 316 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 CCNB2O95067 398 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 SMPD1P17405 629 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 GRK4P32298 578 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 PSEN2P49810 448 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 PTPN5P54829 565 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 VLDLRP98155 873 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 IFITM2Q01629 132 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 NFE2Q16621 373 aaPredicted RBP12.65□□□□□ -0.38
TRIM35-201ENST00000305364 KLHL12Q53G59 568 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 LINGO4Q6UY18 593 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 PIANPQ8IYJ0 282 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 LRRC17Q8N6Y2 441 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 KCNJ9Q92806 393 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 MED8Q96G25 268 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 PAAF1Q9BRP4 392 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 SYT17Q9BSW7 474 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 TMEM30AQ9NV96 361 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 TAS2R16Q9NYV7 291 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 FZD4Q9ULV1 537 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 ING4Q9UNL4 249 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 A0A1W2PQ09 198 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 H3BM21 787 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 TSPAN4O14817 238 aa12.65□□□□□ -0.38
TRIM35-201ENST00000305364 TBCEQ15813 527 aaPredicted RBP12.65□□□□□ -0.38
TRIM35-201ENST00000305364 WSCD2Q2TBF2 565 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms