RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 ADAMTS7Q9UKP4 1686 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 MEGF11A6BM72 1044 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 PCP4L1A6NKN8 68 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 SMLR1H3BR10 107 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 SLC34A2O95436 690 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 SPATA31C1P0DKV0 1188 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 PPP3CBP16298 524 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 HLA-DMAP28067 261 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 HOXD12P35452 270 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 ATP5C1P36542 298 aaKnown RBP5.12□□□□□ -1.59
SCN1A-201ENST00000303395 KLK7P49862 253 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 SCAND1P57086 179 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 RAP2BP61225 183 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 EEF1A1P68104 462 aaKnown RBP5.12□□□□□ -1.59
SCN1A-201ENST00000303395 EEF1A1P5Q5VTE0 462 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 KANSL1Q7Z3B3 1105 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 OR7G1Q8NGA0 311 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 ADAMTS18Q8TE60 1221 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 MYRFLQ96LU7 910 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 FAM83DQ9H4H8 585 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 FBXO6Q9NRD1 293 aaPredicted RBP5.12□□□□□ -1.59
SCN1A-201ENST00000303395 TMEM260Q9NX78 707 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 ARMCX1Q9P291 453 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 PSAT1Q9Y617 370 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 ANKRD34BA5PLL1 514 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 CAPN14A8MX76 684 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 FAAHO00519 579 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 XPNPEP2O43895 674 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 CLDN9O95484 217 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 ADRA1BP35368 520 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 DDOSTP39656 456 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 RGS19P49795 217 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 ZNF132P52740 706 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 SNAPC2Q13487 334 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 CSHL1Q14406 222 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 CBWD6Q4V339 395 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 CBWD3Q5JTY5 395 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 CBWD5Q5RIA9 395 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 ESPNLQ6ZVH7 1005 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 SMIM15Q7Z3B0 74 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 TMEM135Q86UB9 458 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 PRR22Q8IZ63 422 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 ZDHHC14Q8IZN3 488 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 SLC44A3Q8N4M1 653 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 RHOXF1Q8NHV9 184 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 FIG4Q92562 907 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 HDAC10Q969S8 669 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 BRD9Q9H8M2 597 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 SLCO1B3Q9NPD5 702 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 RBM22Q9NW64 420 aaKnown RBP eCLIP5.12□□□□□ -1.591e-6■■■■■ 27.8
SCN1A-201ENST00000303395 CCDC167Q9P0B6 97 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 IRF6O14896 467 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 EBLN1P0CF75 366 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 GKN3PP0CG01 181 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 HTR1BP28222 390 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 GNALP38405 381 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 RPL13AP40429 203 aaKnown RBP5.12□□□□□ -1.59
SCN1A-201ENST00000303395 OR1G1P47890 313 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 KHKP50053 298 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 POLR2HP52434 150 aaKnown RBP5.12□□□□□ -1.59
SCN1A-201ENST00000303395 TIGD6Q17RP2 521 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 CRY2Q49AN0 593 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 KIAA1161Q6NSJ0 714 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 RTL4Q6ZR62 310 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 MON1AQ86VX9 555 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 TARS2Q9BW92 718 aaKnown RBP5.12□□□□□ -1.59
SCN1A-201ENST00000303395 SDR39U1Q9NRG7 319 aaPredicted RBP5.12□□□□□ -1.59
SCN1A-201ENST00000303395 GJB4Q9NTQ9 266 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 TMEM184CQ9NVA4 438 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 HCN4Q9Y3Q4 1203 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 NRCAMQ92823 1304 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 SCN3AQ9NY46 2000 aa5.12□□□□□ -1.59
SCN1A-201ENST00000303395 C9IYK1 514 aa5.11□□□□□ -1.59
SCN1A-201ENST00000303395 RFXANKO14593 260 aa5.11□□□□□ -1.59
SCN1A-201ENST00000303395 CYB5BO43169 146 aa5.11□□□□□ -1.59
SCN1A-201ENST00000303395 NARSO43776 548 aaKnown RBP5.11□□□□□ -1.59
SCN1A-201ENST00000303395 XYLBO75191 536 aa5.11□□□□□ -1.59
SCN1A-201ENST00000303395 LY86O95711 162 aa5.11□□□□□ -1.59
SCN1A-201ENST00000303395 SLC2A2P11168 524 aaPredicted RBP5.11□□□□□ -1.59
SCN1A-201ENST00000303395 NCK1P16333 377 aa5.11□□□□□ -1.59
SCN1A-201ENST00000303395 FOXN2P32314 431 aa5.11□□□□□ -1.59
SCN1A-201ENST00000303395 TAGLN2P37802 199 aaKnown RBP5.11□□□□□ -1.59
SCN1A-201ENST00000303395 SMSP52788 366 aa5.11□□□□□ -1.59
SCN1A-201ENST00000303395 BACE1P56817 501 aa5.11□□□□□ -1.59
SCN1A-201ENST00000303395 NDUFAF5Q5TEU4 345 aa5.11□□□□□ -1.59
SCN1A-201ENST00000303395 FAM131AQ6UXB0 335 aa5.11□□□□□ -1.59
SCN1A-201ENST00000303395 IDO2Q6ZQW0 420 aa5.11□□□□□ -1.59
SCN1A-201ENST00000303395 ZNF550Q7Z398 422 aa5.11□□□□□ -1.59
SCN1A-201ENST00000303395 P4HA3Q7Z4N8 544 aa5.11□□□□□ -1.59
SCN1A-201ENST00000303395 SYT12Q8IV01 421 aa5.11□□□□□ -1.59
SCN1A-201ENST00000303395 REM2Q8IYK8 340 aaPredicted RBP5.11□□□□□ -1.59
SCN1A-201ENST00000303395 GPR150Q8NGU9 434 aa5.11□□□□□ -1.59
SCN1A-201ENST00000303395 BCO2Q9BYV7 579 aa5.11□□□□□ -1.59
SCN1A-201ENST00000303395 SCP2D1Q9UJQ7 156 aa5.11□□□□□ -1.59
SCN1A-201ENST00000303395 MRPS7Q9Y2R9 242 aaKnown RBP5.11□□□□□ -1.59
SCN1A-201ENST00000303395 KANTRA0A1W2PQU2 76 aa5.11□□□□□ -1.59
SCN1A-201ENST00000303395 ANKRD61A6NGH8 418 aa5.11□□□□□ -1.59
SCN1A-201ENST00000303395 RIIAD1A6NNX1 92 aa5.11□□□□□ -1.59
SCN1A-201ENST00000303395 LRRN3E7EW58 273 aa5.11□□□□□ -1.59
SCN1A-201ENST00000303395 SSX4O60224 188 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms