RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 TAC3Q9UHF0 121 aa21.48■■□□□ 1.03
SMAD1-201ENST00000302085 C15orf38-AP3S2A0A0A6YYH1 394 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 TCRBV3S1A0A5B6 114 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 DFNA5O60443 496 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 KCNH1O95259 989 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 HNRNPA2B1P22626 353 aaKnown RBP21.47■■□□□ 1.03
SMAD1-201ENST00000302085 S100A3P33764 101 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 RHDQ02161 417 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 SELPLGQ14242 412 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 UAP1L1Q3KQV9 507 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 ARPINQ7Z6K5 226 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 FAM129CQ86XR2 697 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 KBTBD2Q8IY47 623 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 ZNF687Q8N1G0 1237 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 PGBD3Q8N328 593 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 C1orf52Q8N6N3 182 aaKnown RBP21.47■■□□□ 1.03
SMAD1-201ENST00000302085 SMPDL3AQ92484 453 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 GFM2Q969S9 779 aaKnown RBP21.47■■□□□ 1.03
SMAD1-201ENST00000302085 ANKRD27Q96NW4 1050 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 OR2M4Q96R27 311 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 VAPAQ9P0L0 249 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 EGFL7Q9UHF1 273 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 PCM1Q15154 2024 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 MAN2B1O00754 1011 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 ATP6V1B2P21281 511 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 BNIP2Q12982 314 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 SYT12Q8IV01 421 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 MSRB3Q8IXL7 192 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 PQLC1Q8N2U9 271 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 LINC01555Q8NAE3 123 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 DNAJC9Q8WXX5 260 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 PDXPQ96GD0 296 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 ALG2Q9H553 416 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 C2orf42Q9NWW7 574 aa21.47■■□□□ 1.03
SMAD1-201ENST00000302085 SCHIP1Q9P0W5 487 aaPredicted RBP21.47■■□□□ 1.03
SMAD1-201ENST00000302085 PRSS51A0A1B0GVH4 220 aa21.46■■□□□ 1.03
SMAD1-201ENST00000302085 OR52A4PA6NMU1 304 aa21.46■■□□□ 1.03
SMAD1-201ENST00000302085 ZNF839A8K0R7 811 aa21.46■■□□□ 1.03
SMAD1-201ENST00000302085 AKAP10O43572 662 aa21.46■■□□□ 1.03
SMAD1-201ENST00000302085 MYO1DO94832 1006 aa21.46■■□□□ 1.03
SMAD1-201ENST00000302085 APBB3O95704 486 aa21.46■■□□□ 1.03
SMAD1-201ENST00000302085 SEMA4FO95754 770 aa21.46■■□□□ 1.03
SMAD1-201ENST00000302085 TAF11Q15544 211 aa21.46■■□□□ 1.03
SMAD1-201ENST00000302085 PGS1Q32NB8 556 aa21.46■■□□□ 1.03
SMAD1-201ENST00000302085 C10orf62Q5T681 223 aaPredicted RBP21.46■■□□□ 1.03
SMAD1-201ENST00000302085 LPCAT4Q643R3 524 aa21.46■■□□□ 1.03
SMAD1-201ENST00000302085 ZNF852Q6ZMS4 543 aa21.46■■□□□ 1.03
SMAD1-201ENST00000302085 GCNT7Q6ZNI0 430 aa21.46■■□□□ 1.03
SMAD1-201ENST00000302085 IFNEQ86WN2 208 aa21.46■■□□□ 1.03
SMAD1-201ENST00000302085 C17orf64Q86WR6 236 aa21.46■■□□□ 1.03
SMAD1-201ENST00000302085 HLA-CQ95604 372 aa21.46■■□□□ 1.03
SMAD1-201ENST00000302085 SH3KBP1Q96B97 665 aa21.46■■□□□ 1.03
SMAD1-201ENST00000302085 WDR92Q96MX6 357 aa21.46■■□□□ 1.03
SMAD1-201ENST00000302085 XKR8Q9H6D3 395 aa21.46■■□□□ 1.03
SMAD1-201ENST00000302085 PRM3Q9NNZ6 103 aa21.46■■□□□ 1.03
SMAD1-201ENST00000302085 POLMQ9NP87 494 aaPredicted RBP21.46■■□□□ 1.03
SMAD1-201ENST00000302085 DMRT3Q9NQL9 472 aa21.46■■□□□ 1.03
SMAD1-201ENST00000302085 USP22Q9UPT9 525 aa21.46■■□□□ 1.03
SMAD1-201ENST00000302085 PDZK1P1A8MUH7 402 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 PRPS1L1P21108 318 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 PSMB5P28074 263 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 RPE65Q16518 533 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 MUM1Q2TAK8 710 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 VN1R5Q7Z5H4 357 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 SLCO4A1Q96BD0 722 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 DUS3LQ96G46 650 aaKnown RBP21.45■■□□□ 1.02
SMAD1-201ENST00000302085 ZNF570Q96NI8 536 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 KCTD14Q9BQ13 255 aaPredicted RBP21.45■■□□□ 1.02
SMAD1-201ENST00000302085 SERHLQ9NQF3 203 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 CUEDC1Q9NWM3 386 aaPredicted RBP21.45■■□□□ 1.02
SMAD1-201ENST00000302085 SLC25A37Q9NYZ2 338 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 C6orf203Q9P0P8 240 aaPredicted RBP21.45■■□□□ 1.02
SMAD1-201ENST00000302085 PNMA8BQ9ULN7 279 aaPredicted RBP21.45■■□□□ 1.02
SMAD1-201ENST00000302085 TSC22D4Q9Y3Q8 395 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 PRAMEF33A0A0G2JMD5 474 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 CASQ2O14958 399 aaPredicted RBP21.45■■□□□ 1.02
SMAD1-201ENST00000302085 TGFB1P01137 390 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 DGKEP52429 567 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 MTPNP58546 118 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 CTBSQ01459 385 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 SPIN4Q56A73 249 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 SWT1Q5T5J6 900 aaKnown RBP21.45■■□□□ 1.02
SMAD1-201ENST00000302085 LILRA2Q8N149 483 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 GPR156Q8NFN8 814 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 OR8J3Q8NGG0 315 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 UBE2E3Q969T4 207 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 TSACCQ96A04 125 aaPredicted RBP21.45■■□□□ 1.02
SMAD1-201ENST00000302085 LRGUKQ96M69 825 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 PCBD2Q9H0N5 130 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 C6orf106Q9H6K1 298 aaPredicted RBP21.45■■□□□ 1.02
SMAD1-201ENST00000302085 PELI2Q9HAT8 420 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 SLC6A13Q9NSD5 602 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 ACTR3BQ9P1U1 418 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 CA14Q9ULX7 337 aa21.45■■□□□ 1.02
SMAD1-201ENST00000302085 PRMT3O60678 531 aa21.44■■□□□ 1.02
SMAD1-201ENST00000302085 B3GALT4O96024 378 aa21.44■■□□□ 1.02
SMAD1-201ENST00000302085 IGLV3-19P01714 112 aa21.44■■□□□ 1.02
SMAD1-201ENST00000302085 PIK3CBP42338 1070 aa21.44■■□□□ 1.02
SMAD1-201ENST00000302085 UGT8Q16880 541 aa21.44■■□□□ 1.02
SMAD1-201ENST00000302085 TMIGD1Q6UXZ0 262 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms