RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 KLRG1Q96E93 195 aa14□□□□□ -0.17
CDT1-201ENST00000301019 PDLIM5Q96HC4 596 aaKnown RBP14□□□□□ -0.17
CDT1-201ENST00000301019 TMEM80Q96HE8 168 aa14□□□□□ -0.17
CDT1-201ENST00000301019 TMEM209Q96SK2 561 aa14□□□□□ -0.17
CDT1-201ENST00000301019 IMPAD1Q9NX62 359 aa14□□□□□ -0.17
CDT1-201ENST00000301019 SPATA2Q9UM82 520 aa14□□□□□ -0.17
CDT1-201ENST00000301019 NDRG2Q9UN36 371 aaKnown RBP14□□□□□ -0.17
CDT1-201ENST00000301019 PCDHGB1Q9Y5G3 927 aa14□□□□□ -0.17
CDT1-201ENST00000301019 GLTPD2A6NH11 291 aa14□□□□□ -0.17
CDT1-201ENST00000301019 ADM5C9JUS6 153 aa14□□□□□ -0.17
CDT1-201ENST00000301019 CYP17A1P05093 508 aa14□□□□□ -0.17
CDT1-201ENST00000301019 NNMTP40261 264 aa14□□□□□ -0.17
CDT1-201ENST00000301019 KCNQ1P51787 676 aa14□□□□□ -0.17
CDT1-201ENST00000301019 WNT3AP56704 352 aa14□□□□□ -0.17
CDT1-201ENST00000301019 FGL2Q14314 439 aa14□□□□□ -0.17
CDT1-201ENST00000301019 MFSD13AQ14CX5 517 aa14□□□□□ -0.17
CDT1-201ENST00000301019 LIPKQ5VXJ0 399 aa14□□□□□ -0.17
CDT1-201ENST00000301019 SLC13A3Q8WWT9 602 aa14□□□□□ -0.17
CDT1-201ENST00000301019 COPS5Q92905 334 aa14□□□□□ -0.17
CDT1-201ENST00000301019 TSSK3Q96PN8 268 aa14□□□□□ -0.17
CDT1-201ENST00000301019 TMEM184CQ9NVA4 438 aa14□□□□□ -0.17
CDT1-201ENST00000301019 CFL2Q9Y281 166 aa14□□□□□ -0.17
CDT1-201ENST00000301019 SSC5DA1L4H1 1573 aa14□□□□□ -0.17
CDT1-201ENST00000301019 ISM1B1AKI9 464 aa14□□□□□ -0.17
CDT1-201ENST00000301019 DNAJB5O75953 348 aa14□□□□□ -0.17
CDT1-201ENST00000301019 NUDT1P36639 197 aa14□□□□□ -0.17
CDT1-201ENST00000301019 TKTL1P51854 596 aa14□□□□□ -0.17
CDT1-201ENST00000301019 ERVK-8P63133 956 aa14□□□□□ -0.17
CDT1-201ENST00000301019 RBP5P82980 135 aa14□□□□□ -0.17
CDT1-201ENST00000301019 P2RY14Q15391 338 aa14□□□□□ -0.17
CDT1-201ENST00000301019 MFSD14CQ5VZR4 134 aa14□□□□□ -0.17
CDT1-201ENST00000301019 OR2T5Q6IEZ7 315 aa14□□□□□ -0.17
CDT1-201ENST00000301019 TIGD7Q6NT04 549 aaPredicted RBP14□□□□□ -0.17
CDT1-201ENST00000301019 LETMD1Q6P1Q0 360 aa14□□□□□ -0.17
CDT1-201ENST00000301019 ERICH5Q6P6B1 374 aa14□□□□□ -0.17
CDT1-201ENST00000301019 ZNF549Q6P9A3 640 aa14□□□□□ -0.17
CDT1-201ENST00000301019 PDZD4Q76G19 769 aaPredicted RBP14□□□□□ -0.17
CDT1-201ENST00000301019 C19orf18Q8NEA5 215 aa14□□□□□ -0.17
CDT1-201ENST00000301019 OR2T29Q8NH02 315 aa14□□□□□ -0.17
CDT1-201ENST00000301019 ST8SIA4Q92187 359 aa14□□□□□ -0.17
CDT1-201ENST00000301019 LINC00052Q96N35 136 aa14□□□□□ -0.17
CDT1-201ENST00000301019 THUMPD1Q9NXG2 353 aaKnown RBP14□□□□□ -0.17
CDT1-201ENST00000301019 NPAP1Q9NZP6 1156 aa14□□□□□ -0.17
CDT1-201ENST00000301019 PIPSLA2A3N6 862 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 GSAPA4D1B5 854 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 TOR1AO14656 332 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 PLA2G10O15496 165 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 TIE1P35590 1138 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 ABRAXAS2Q15018 415 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 BHLHB9Q6PI77 547 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 ZNF605Q86T29 641 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 CILP2Q8IUL8 1156 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 TTLQ8NG68 377 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 UPRTQ96BW1 309 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 USB1Q9BQ65 265 aaKnown RBP13.99□□□□□ -0.17
CDT1-201ENST00000301019 ULBP1Q9BZM6 244 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 TMEM134Q9H6X4 195 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 FAM105AQ9NUU6 356 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 DUSP12Q9UNI6 340 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 ARPC4-TTLL3A0A0A6YYG9 625 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 A0A1W2PRG6 482 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 CFDP00746 253 aaPredicted RBP13.99□□□□□ -0.17
CDT1-201ENST00000301019 MYL3P08590 195 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 PTPRAP18433 802 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 MAGEA11P43364 429 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 CDKN1CP49918 316 aaPredicted RBP13.99□□□□□ -0.17
CDT1-201ENST00000301019 EFNA5P52803 228 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 FOXM1Q08050 763 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 FADDQ13158 208 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 RFX4Q33E94 735 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 ZBTB37Q5TC79 503 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 TRIQKQ629K1 86 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 DOK6Q6PKX4 331 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 PAF1Q8N7H5 531 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 ZFP41Q8N8Y5 198 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 GPRASP2Q96D09 838 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 WDCPQ9H6R7 721 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 SCPEP1Q9HB40 452 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 CLEC4AQ9UMR7 237 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 PCDHGB2Q9Y5G2 931 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 PCDHGA6Q9Y5G7 932 aa13.99□□□□□ -0.17
CDT1-201ENST00000301019 NCR1O76036 304 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 C9P02748 559 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 JUNDP17535 347 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 ALAS2P22557 587 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 CDKN2CP42773 168 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 USP50Q70EL3 339 aaPredicted RBP13.98□□□□□ -0.17
CDT1-201ENST00000301019 EFHBQ8N7U6 833 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 SPPL2AQ8TCT8 520 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 CENPIQ92674 756 aaPredicted RBP13.98□□□□□ -0.17
CDT1-201ENST00000301019 PYURFQ96I23 114 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 QRFPRQ96P65 431 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 UQCC2Q9BRT2 126 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 TRMOQ9BU70 441 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 SRRQ9GZT4 340 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 RHCGQ9UBD6 479 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 EIF3KQ9UBQ5 218 aaKnown RBP13.98□□□□□ -0.17
CDT1-201ENST00000301019 SCN1AP35498 2009 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 LOC105369274A0A096LPK9 316 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 PRAMEF33A0A0G2JMD5 474 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms