RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ZNF362Q5T0B9 420 aaPredicted RBP21.23■□□□□ 0.99
TPM4-201ENST00000300933 C9orf64Q5T6V5 341 aa21.23■□□□□ 0.99
TPM4-201ENST00000300933 FRG2Q64ET8 278 aa21.23■□□□□ 0.99
TPM4-201ENST00000300933 C2orf73Q8N5S3 287 aaPredicted RBP21.23■□□□□ 0.99
TPM4-201ENST00000300933 OR13F1Q8NGS4 319 aa21.23■□□□□ 0.99
TPM4-201ENST00000300933 SNX19Q92543 992 aa21.23■□□□□ 0.99
TPM4-201ENST00000300933 FRG2BQ96QU4 278 aa21.23■□□□□ 0.99
TPM4-201ENST00000300933 CD320Q9NPF0 282 aa21.23■□□□□ 0.99
TPM4-201ENST00000300933 GPRC5BQ9NZH0 403 aa21.23■□□□□ 0.99
TPM4-201ENST00000300933 KLHL42Q9P2K6 505 aa21.23■□□□□ 0.99
TPM4-201ENST00000300933 RBMX2Q9Y388 322 aaKnown RBP21.23■□□□□ 0.99
TPM4-201ENST00000300933 TRIOO75962 3097 aa21.23■□□□□ 0.99
TPM4-201ENST00000300933 HTR1EP28566 365 aa21.23■□□□□ 0.99
TPM4-201ENST00000300933 PBX2P40425 430 aa21.23■□□□□ 0.99
TPM4-201ENST00000300933 RAET1GQ6H3X3 334 aa21.23■□□□□ 0.99
TPM4-201ENST00000300933 AGTRAPQ6RW13 159 aa21.23■□□□□ 0.99
TPM4-201ENST00000300933 TBPL2Q6SJ96 375 aa21.23■□□□□ 0.99
TPM4-201ENST00000300933 CRTC3Q6UUV7 619 aa21.23■□□□□ 0.99
TPM4-201ENST00000300933 LEMD2Q8NC56 503 aa21.23■□□□□ 0.99
TPM4-201ENST00000300933 BPIFB1Q8TDL5 484 aa21.23■□□□□ 0.99
TPM4-201ENST00000300933 MUS81Q96NY9 551 aa21.23■□□□□ 0.99
TPM4-201ENST00000300933 CSF3RQ99062 836 aa21.23■□□□□ 0.99
TPM4-201ENST00000300933 SACM1LQ9NTJ5 587 aa21.23■□□□□ 0.99
TPM4-201ENST00000300933 DEC1Q9P2X7 70 aa21.23■□□□□ 0.99
TPM4-201ENST00000300933 FAM32AQ9Y421 112 aaKnown RBP21.23■□□□□ 0.99
TPM4-201ENST00000300933 ATG13O75143 517 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 E2F6O75461 281 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 SOD1P00441 154 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 HNMTP50135 292 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 DCDC1P59894 354 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 GAB4Q2WGN9 574 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 TMEM214Q6NUQ4 689 aaKnown RBP21.22■□□□□ 0.99
TPM4-201ENST00000300933 ENPP6Q6UWR7 440 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 SPRED1Q7Z699 444 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 ETFBKMTQ8IXQ9 262 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 ZNF557Q8N988 423 aaPredicted RBP21.22■□□□□ 0.99
TPM4-201ENST00000300933 SLC29A3Q9BZD2 475 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 PCYT1BQ9Y5K3 369 aaPredicted RBP21.22■□□□□ 0.99
TPM4-201ENST00000300933 CLPXO76031 633 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 HLCSP50747 726 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 CYP4F3Q08477 520 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 MAD2L1Q13257 205 aaPredicted RBP21.22■□□□□ 0.99
TPM4-201ENST00000300933 DOC2AQ14183 400 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 OR2T12Q8NG77 320 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 PKP4Q99569 1192 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 SLX1AQ9BQ83 275 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 LHPPQ9H008 270 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 ADNPQ9H2P0 1102 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 STOX2Q9P2F5 926 aaPredicted RBP21.22■□□□□ 0.99
TPM4-201ENST00000300933 LRRK1Q38SD2 2015 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 USP34Q70CQ2 3546 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 TSPAN11A1L157 253 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 TBC1D3BA6NDS4 549 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 IDUAP35475 653 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 IST1P53990 364 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 ZNF234Q14588 700 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 CCNYL2Q5T2Q4 361 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 OR4F3Q6IEY1 312 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 OR7A2PQ8NGA2 310 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 CCM2Q9BSQ5 444 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 TMEM98Q9Y2Y6 226 aa21.22■□□□□ 0.99
TPM4-201ENST00000300933 TRIM64BA6NI03 449 aa21.21■□□□□ 0.99
TPM4-201ENST00000300933 SRPRAP08240 638 aaKnown RBP21.21■□□□□ 0.99
TPM4-201ENST00000300933 MYCLP1P12525 358 aaPredicted RBP21.21■□□□□ 0.99
TPM4-201ENST00000300933 OPRL1P41146 370 aa21.21■□□□□ 0.99
TPM4-201ENST00000300933 UBE3AQ05086 875 aa21.21■□□□□ 0.99
TPM4-201ENST00000300933 LAPTM5Q13571 262 aa21.21■□□□□ 0.99
TPM4-201ENST00000300933 PDE12Q6L8Q7 609 aaKnown RBP21.21■□□□□ 0.99
TPM4-201ENST00000300933 PIWIL3Q7Z3Z3 882 aaKnown RBP21.21■□□□□ 0.99
TPM4-201ENST00000300933 ASB16Q96NS5 453 aa21.21■□□□□ 0.99
TPM4-201ENST00000300933 SAMD11Q96NU1 681 aa21.21■□□□□ 0.99
TPM4-201ENST00000300933 WARS2Q9UGM6 360 aaKnown RBP21.21■□□□□ 0.99
TPM4-201ENST00000300933 INVSQ9Y283 1065 aa21.21■□□□□ 0.99
TPM4-201ENST00000300933 F5P12259 2224 aa21.21■□□□□ 0.99
TPM4-201ENST00000300933 ALPK3Q96L96 1907 aa21.21■□□□□ 0.99
TPM4-201ENST00000300933 GSTA4O15217 222 aa21.21■□□□□ 0.99
TPM4-201ENST00000300933 LZTS3O60299 673 aaPredicted RBP21.21■□□□□ 0.99
TPM4-201ENST00000300933 ETHE1O95571 254 aa21.21■□□□□ 0.99
TPM4-201ENST00000300933 IL6P05231 212 aa21.21■□□□□ 0.99
TPM4-201ENST00000300933 GPIP06744 558 aa21.21■□□□□ 0.99
TPM4-201ENST00000300933 GSTM1P09488 218 aa21.21■□□□□ 0.99
TPM4-201ENST00000300933 KCNC4Q03721 635 aa21.21■□□□□ 0.99
TPM4-201ENST00000300933 L3MBTL4Q8NA19 623 aa21.21■□□□□ 0.99
TPM4-201ENST00000300933 ING2Q9H160 280 aa21.21■□□□□ 0.99
TPM4-201ENST00000300933 TMEM9Q9P0T7 183 aa21.21■□□□□ 0.99
TPM4-201ENST00000300933 PCDHB3Q9Y5E6 796 aa21.21■□□□□ 0.99
TPM4-201ENST00000300933 C5orf67F2Z3F1 127 aa21.2■□□□□ 0.98
TPM4-201ENST00000300933 C6P13671 934 aa21.2■□□□□ 0.98
TPM4-201ENST00000300933 ZNF24P17028 368 aa21.2■□□□□ 0.98
TPM4-201ENST00000300933 IMPA1P29218 277 aa21.2■□□□□ 0.98
TPM4-201ENST00000300933 S100A3P33764 101 aa21.2■□□□□ 0.98
TPM4-201ENST00000300933 TMBIM6P55061 237 aa21.2■□□□□ 0.98
TPM4-201ENST00000300933 SLC14A1Q13336 389 aa21.2■□□□□ 0.98
TPM4-201ENST00000300933 NKG7Q16617 165 aa21.2■□□□□ 0.98
TPM4-201ENST00000300933 AASDHQ4L235 1098 aaPredicted RBP21.2■□□□□ 0.98
TPM4-201ENST00000300933 TANGO2Q6ICL3 276 aa21.2■□□□□ 0.98
TPM4-201ENST00000300933 DOK6Q6PKX4 331 aa21.2■□□□□ 0.98
TPM4-201ENST00000300933 TCAIMQ8N3R3 496 aa21.2■□□□□ 0.98
TPM4-201ENST00000300933 PHOSPHO2Q8TCD6 241 aa21.2■□□□□ 0.98
TPM4-201ENST00000300933 DTD2Q96FN9 168 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms