RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 BNIP3Q12983 259 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 RAB31Q13636 194 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 ABRAXAS2Q15018 415 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 VAMP3Q15836 100 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 SUMF2Q8NBJ7 301 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 E7EQ34 232 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 TOXO94900 526 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 URODP06132 367 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 CKMP06732 381 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 ETFAP13804 333 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 SREBF2Q12772 1141 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 TMEM69Q5SWH9 247 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 ADAM19Q9H013 955 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 PCDHAC1Q9H158 963 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 PCNX1Q96RV3 2341 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 A0A1B0GVG6 124 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 HBP1O60381 514 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 CXCL8P10145 99 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 PGM2L1Q6PCE3 622 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 ADAMTSL2Q86TH1 951 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 ZNF611Q8N823 705 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 OR10R2Q8NGX6 335 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 PPP1R16AQ96I34 528 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 AARSD1Q9BTE6 412 aaKnown RBP10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 RNF121Q9H920 327 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 SACM1LQ9NTJ5 587 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 ZFP57Q9NU63 452 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 MVKQ03426 396 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 NFATC4Q14934 902 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 ZNF584Q8IVC4 421 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 SLC43A2Q8N370 569 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 PTCHD1Q96NR3 888 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 ZNHIT2Q9UHR6 403 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 STUB1Q9UNE7 303 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 CNTNAP2Q9UHC6 1331 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 NPIPA5A0A0B4J1W7 369 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 SLC9A3R1O14745 358 aaPredicted RBP10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 IL4RP24394 825 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 ICAM3P32942 547 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 HABP2Q14520 560 aaPredicted RBP10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 NRROSQ86YC3 692 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 CRYBG2Q8N1P7 616 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 ART4Q93070 314 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 YTHDF1Q9BYJ9 559 aaKnown RBP10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 POTEKPQ9BYX7 375 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 GCATO75600 419 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 SNCGO76070 127 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 TUBP50607 506 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 EN1Q05925 392 aaPredicted RBP10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 LAMTOR4Q0VGL1 99 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 NTRK2Q16620 822 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 PROKR2Q8NFJ6 384 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 ACTR6Q9GZN1 396 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 SALL1Q9NSC2 1324 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 A0A1W2PPM1 405 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 DLGAP1O14490 977 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 RPS17P08708 135 aaKnown RBP10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 BDKRB2P30411 391 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 GSG1LQ6UXU4 331 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 MAB21L3Q8N8X9 362 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 ZNF420Q8TAQ5 688 aaPredicted RBP10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 ZNF596Q8TC21 504 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 DCAKDQ8WVC6 231 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 ATP13A1Q9HD20 1204 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 POMT1Q9Y6A1 747 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 IMPA2O14732 288 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 ABHD2P08910 425 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 CHRNA4P43681 627 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 RPL26P61254 145 aaKnown RBP10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 CPNE9Q8IYJ1 553 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 ZNF676Q8N7Q3 588 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 OR8K5Q8NH50 307 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 CADM1Q9BY67 442 aaKnown RBP10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 PCDHGA7Q9Y5G6 932 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 PARP4Q9UKK3 1724 aaKnown RBP10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 ANKUB1A6NFN9 424 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 CPT1AP50416 773 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 CHSY3Q70JA7 882 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 CUZD1Q86UP6 607 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 SPATA20Q8TB22 786 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 DNMT3LQ9UJW3 386 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 TECPR2O15040 1411 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 TPT1P13693 172 aaKnown RBP10.9□□□□□ -0.66
HDGFL3-201ENST00000299633 PSMB4P28070 264 aa10.9□□□□□ -0.66
HDGFL3-201ENST00000299633 SIM2Q14190 667 aaPredicted RBP10.9□□□□□ -0.66
HDGFL3-201ENST00000299633 SH3PXD2AQ5TCZ1 1133 aa10.9□□□□□ -0.66
HDGFL3-201ENST00000299633 STON2Q8WXE9 905 aa10.9□□□□□ -0.66
HDGFL3-201ENST00000299633 TBX5Q99593 518 aa10.9□□□□□ -0.66
HDGFL3-201ENST00000299633 MAN2C1Q9NTJ4 1040 aa10.9□□□□□ -0.66
HDGFL3-201ENST00000299633 ENTPD3O75355 529 aa10.9□□□□□ -0.66
HDGFL3-201ENST00000299633 CATP04040 527 aaKnown RBP10.9□□□□□ -0.66
HDGFL3-201ENST00000299633 CD86P42081 329 aa10.9□□□□□ -0.66
HDGFL3-201ENST00000299633 SCARB2Q14108 478 aa10.9□□□□□ -0.66
HDGFL3-201ENST00000299633 PRAMEF13Q5VWM6 474 aa10.9□□□□□ -0.66
HDGFL3-201ENST00000299633 ANKRD54Q6NXT1 300 aa10.9□□□□□ -0.66
HDGFL3-201ENST00000299633 MYLIPQ8WY64 445 aa10.9□□□□□ -0.66
HDGFL3-201ENST00000299633 ROPN1LQ96C74 230 aa10.9□□□□□ -0.66
HDGFL3-201ENST00000299633 TM9SF2Q99805 663 aa10.9□□□□□ -0.66
HDGFL3-201ENST00000299633 PDCD1LG2Q9BQ51 273 aa10.9□□□□□ -0.66
HDGFL3-201ENST00000299633 FN3KQ9H479 309 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms